Gene Ndas_5257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5257 
Symbol 
ID9249155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand
Start bp420439 
End bp421515 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content75% 
IMG OID 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_003683143 
Protein GI297564170 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGCCC AGACCCGCGA CGACGTGGTC CTGGACATCC GGGGCCTTCG GACCCACTTC 
ACCACCGACG ACGCCGTGGT GCGCGCCGTG GACGGGGTGG ACCTGGCGGT CCGCCGGGGC
AGCACGCTGT GCGTGGTCGG CGAGAGCGGC TGCGGCAAGA GCGCCATGGC CCGCTCGGTG
CTGCGGCTGG TGGAGCCGCC CGGCGAGGTG GTGGGCGGCC GGATCCTGCT GCACCCGGAA
CAGGGGGGCG GGCAGCCCGT GGACCTGGCC GCCCTGCACC CCACCGGCAG GGAGATCCGC
GCGGTGCGCG GCCGCGAGGT GGCCATGGTC TTCCAGGAGC CCATGTCCTC GCTGTCCCTG
GTGCACACCG TCGGCAACCA GATCGGCGAG TCCCTGCGCG TGCACCACCG CGTGTCCCGC
CGTGAGGCCC GCGAACGCTC CGTGGACCTG CTCGAACGCG TGCGGGTCCC CGGCGCCGGA
CGCGTCGTGG ACTCCTACCC CTTCCAGCTC TCCGGCGGGA TGCGCCAGCG GGTCATGATC
GCGGCGGCCC TGGCGTGCGG GCCGCGCGTG CTCATCGCCG ACGAGCCCAC CACCGCGCTG
GACGTGACCA CCCAGGCACA GATCCTCGAC CTGTTCGCCG ACCTGCGCCG CGACACCGGC
ATGGGCCTGC TCTTCATCAC CCACGACATG GGCGTGGTCG CGGAGATGGC CGACGAGGTC
GCCGTCATGT ACCTGGGCAC GGTGGTCGAG CAGGGGCCGG TGGACGAGAT CTTCCACGAC
CCCCGCCACC CCTACACCCG CGCCCTGCTG GAGGCGGTCC CCCGGATCGG CGCGGCCCGC
TCACGCCGCC TGCCCACCAT CCGGGGCGCC ATCCCCGACC CCGGGAGCCA GCCCACCGGC
TGCGTGTTCC GCACCCGCTG CCCCCAGGCC GTGGAGGGGC TGTGCGACAC CACCGTCCCC
CCGGTCACCG CCCCCGGCCC CGGCCGCCGG GTGCGCTGCC TCCTGGAGGG CGGCGTCCCG
GCCCCAGGCG GCGCGGGCGC CGAACCGACC AGCGAGGAGA CCGTCGATGC CGACTGA
 
Protein sequence
MAAQTRDDVV LDIRGLRTHF TTDDAVVRAV DGVDLAVRRG STLCVVGESG CGKSAMARSV 
LRLVEPPGEV VGGRILLHPE QGGGQPVDLA ALHPTGREIR AVRGREVAMV FQEPMSSLSL
VHTVGNQIGE SLRVHHRVSR REARERSVDL LERVRVPGAG RVVDSYPFQL SGGMRQRVMI
AAALACGPRV LIADEPTTAL DVTTQAQILD LFADLRRDTG MGLLFITHDM GVVAEMADEV
AVMYLGTVVE QGPVDEIFHD PRHPYTRALL EAVPRIGAAR SRRLPTIRGA IPDPGSQPTG
CVFRTRCPQA VEGLCDTTVP PVTAPGPGRR VRCLLEGGVP APGGAGAEPT SEETVDAD