| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_5256 |
|---|
| Symbol | |
|---|
| ID | 9249154 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014211 |
|---|
| Strand | - |
|---|
| Start bp | 419292 |
|---|
| End bp | 420449 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | |
|---|
| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
|---|
| Protein accession | YP_003683142 |
|---|
| Protein GI | 297564169 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.407 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGACTG AGACACCGGC CGCGACGCCG GACCCCGCGC CGCGCGGACC CGCGTCCGCC
ACCCCGGCCG AACCCGTCCT GAGCATCCGC GGCCTGCGGG TGGACTACCC CGTGCGCGGA
CGCTCGCGGC GCGGCCCCCG CCACGTGCGG GCCGTGGCCG GGGTGGACCT GGACGTGTAC
CCGGGCGAGA CCCTCGGCCT GGTCGGGGAG TCCGGGTGCG GCAAGACCAC CCTGGGTTCG
AGCGTCATGC GGGCCCGCCC GGAGGCCTCG GGGGAGATCC GCTACCGCGC CTCCGACGGC
CGCGTCCTGG AGGCCCTGGC GCTGCCCCGC GGCGACACCG CCGCCTACCG GCGGGAGGTG
CGGATGGTCT TCCAGGACCC GCAGTCCTCC CTCAACCCCC GGATGACCCT GCGCGACATC
GTCGGCGAGC CGCTGCGGAT GCTGCTGGGG CTGCGCGGAC AGGAGCTGGA GGCGCGCGTG
CGCGAGGTCA TGGAACGGGT GGGGCTGCAC CCCGACCACC TGCGCCGCCA CCCGCACGCG
TTCTCCGGGG GCCAGCGCCA GCGGGTGGCC ATCGCCCGCG CCCTGGTCCC GGGCCCGCGC
CTGGTCGTGG CCGACGAGGC GGTCAGCGCC CTGGACACCT CCGTGCGCTC GCAGATCCTC
AACCTCCTCC AGGACCTCCA GGACGACCTG GGCCTGACCT ACCTGTTCGT CTCGCACGAC
CTGTCGGTGG TCGAGCACGT GTGCGACCGG GTCGCGGTGA TGTACCTCGG CCGGATCGTG
GAGGTCGCGC CCACCGACGA GCTGTTCGGG CGGCCGAGGC ACCCCTACAC CGAGGCGCTG
ATCTCCGCGG TGCCCATCCC CGACCCGCGG CTGCGCGGCA CCCGCGAGCG CGTCCGGCTC
ACCGGCGAGG TGCCCGACCC CTCGCGGCCG CCGTCCGGCT GCCCCTTCCA CCCCCGGTGC
CGGTACGCCA CCGGCCTGTG CGCCGCCGAG GAGCCCGCGC CGCGCACCGT CGCGCCCGGC
CGCACGGTGG CGTGCCACCA CGCCGGGGAA CTCGACCTGG CCGGGATCAC CGCGGACTCC
GCGCCCGGCA CCGCGACCAC CGGTCCCCCG GCCCGCGCGA CGCGGGAACC CCCCACGAGG
CAGGAGCAGG AATCATGA
|
|---|
| Protein sequence | MPTETPAATP DPAPRGPASA TPAEPVLSIR GLRVDYPVRG RSRRGPRHVR AVAGVDLDVY
PGETLGLVGE SGCGKTTLGS SVMRARPEAS GEIRYRASDG RVLEALALPR GDTAAYRREV
RMVFQDPQSS LNPRMTLRDI VGEPLRMLLG LRGQELEARV REVMERVGLH PDHLRRHPHA
FSGGQRQRVA IARALVPGPR LVVADEAVSA LDTSVRSQIL NLLQDLQDDL GLTYLFVSHD
LSVVEHVCDR VAVMYLGRIV EVAPTDELFG RPRHPYTEAL ISAVPIPDPR LRGTRERVRL
TGEVPDPSRP PSGCPFHPRC RYATGLCAAE EPAPRTVAPG RTVACHHAGE LDLAGITADS
APGTATTGPP ARATREPPTR QEQES
|
|---|
| |