Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_5066 |
Symbol | |
ID | 9248955 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014211 |
Strand | + |
Start bp | 208702 |
End bp | 210354 |
Gene Length | 1653 bp |
Protein Length | 550 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | proton-translocating NADH-quinone oxidoreductase, chain N |
Protein accession | YP_003682953 |
Protein GI | 297563980 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.146495 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGATCCCCC ACATGGACCT TCCCGTCATC ACCGAGGCGG CGCCGCAGAT GGACTGGTGG CTGCTCGCGC CGCTGCTCAC GGTGTTCGCC GCCGGTGTTC TGGGCGTGCT GTTCGAGGCG TTCGTCCCCC AGGGGCGGCG CCGCGCCATC CAGATCGGGC TCGCGGCGCT CGCGCTGCTG GCCGCGTTCG TCCTGCTGGT GCTCCAGGTG GGCTCGCTGC CCGAGGACGC GCCGGGGGTG ACGGTCGGCG CCGGGGCGCT GGCGGTGGAC CGGACGGTGA TCTTCTTCCA GGGCACCATC ACCGTGCTCG CGCTGGTGAG CCTGCTGCTG ATCTCCGAGC GCCGGGACGG GCGCGACGCG TTCGCCGCGC AGGCGGCGAC GGTGCCCGGG AGCGAGGAGG AGCGCGCGCA CATCCTGGCG GGCTCCCAGC ACACCGAGGT GTACCCGCTG GTGATGTTCG CGGTGCTGGG GATGCTGATG TTCCCGGCCT CGAACGACTT CCTGACGATG TTCATCGCGC TGGAGGTCAT GAGCCTGCCG CTGTACCTGC TGTGCGGGCT GGCCCGGCGC CGCCGCCTGT TCTCGCAGGA GGCCGCGGTC AAGTACTTCC TGCTGGGCGC GTTCTCCTCG GCGTTCTTCC TGTTCGGCGC CGCCATGGTC TACGGCTACG CGGGCTCGGT GAACTTCGGC GAGATCCGCG CGGCCGTCGA GGCGGGCGGC GCGGACGTCT TCCAGGGCGG AGACGGCGAG CCGCTGCTGC TCATGGGCAT CGGCCTGGTG GCGATCGGCC TGCTGTTCAA GGTCGGCGCG GTGCCCTTCC ACAACTGGAA GCCGGACGTG TACCAGGGCG CGCCGACCCC GATCACGGCG CTGATGGCCT CCTGCACGCT GGTCGCCGCG TTCGGCGCCC TGCTGCGGGT GTTCTTCGTG CCCTTCGGCG GCTCGGCCCA GACCTGGGAG CCGATGCTGT GGGCGGTGGC CGTCCTGACG ATGGTCGTGG CCGCGGTCAT CGCGGTGACC CAGCGCGACG TCAAGCGGCT GCTGGCCTAC TCGTCGGTGG TGCACGCCGG GTTCATCCTG ACCGCCGTCG TGGCGGGCAG CACGGACGGG CTCGCGGGCG CCATGTTCTA CCTGGCGGCC TACGGGTTCA CCACGCTGGG CGCGTTCGCC GTGGTGACGC TGGTGCGGAC CAAGGACGGC GGCCAGGAGC TGGGCGACCT GGACCGGTGG GCGGGGCTGG GCCGCCGCTC GCCGGTGCTG GCCGGGGCGC TGGCGCTGTT CCTGCTGGCG TTCGCCGGGA TCCCGCTCAC GAGCGGCTTC ATCGGCAAGT TCGCGGTGTT CGAGGCGGCG GTGGCCGCCG GCGCCGTCCC GCTGGTCGTG GTCGGTGTGC TGAGCAGCGC GGTGACCGCG TTCTTCTACG TGCGGATCAT CGTGGTGATG TTCTTCCGGG ACCCGGAGGG CGAGGGCCCC ACGGTGGTGC GCGCGGGCGC GGCCACGGGC GGGGTCATCG CGATCGGGGT GGCGGCGACG CTGCTGCTCG GCGTGTACCC GGGGGCGGTG CTCGACAACC TGCTGCCCCC GGCCGACGCC GACCAGGCCC CGACCTCGGT GATGGTCGAA CAGGCGTCGA CGCAGGCCGG AGGCGCGGAG TGA
|
Protein sequence | MIPHMDLPVI TEAAPQMDWW LLAPLLTVFA AGVLGVLFEA FVPQGRRRAI QIGLAALALL AAFVLLVLQV GSLPEDAPGV TVGAGALAVD RTVIFFQGTI TVLALVSLLL ISERRDGRDA FAAQAATVPG SEEERAHILA GSQHTEVYPL VMFAVLGMLM FPASNDFLTM FIALEVMSLP LYLLCGLARR RRLFSQEAAV KYFLLGAFSS AFFLFGAAMV YGYAGSVNFG EIRAAVEAGG ADVFQGGDGE PLLLMGIGLV AIGLLFKVGA VPFHNWKPDV YQGAPTPITA LMASCTLVAA FGALLRVFFV PFGGSAQTWE PMLWAVAVLT MVVAAVIAVT QRDVKRLLAY SSVVHAGFIL TAVVAGSTDG LAGAMFYLAA YGFTTLGAFA VVTLVRTKDG GQELGDLDRW AGLGRRSPVL AGALALFLLA FAGIPLTSGF IGKFAVFEAA VAAGAVPLVV VGVLSSAVTA FFYVRIIVVM FFRDPEGEGP TVVRAGAATG GVIAIGVAAT LLLGVYPGAV LDNLLPPADA DQAPTSVMVE QASTQAGGAE
|
| |