Gene Ndas_5000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5000 
Symbol 
ID9248889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand+ 
Start bp141489 
End bp142403 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content72% 
IMG OID 
ProductGDSL family lipase 
Protein accessionYP_003682887 
Protein GI297563914 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.189373 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCCGTA CATCCGCCAC CGCCGCGCCC CGATCCCCGC GCCGTGCCCT GGTTCCCGTG 
GCCGTCGCCG CGCTGAGCGC GTCCCTGGTC GCCGCGCCCG CCGCCGCCGA GACCGCGCAG 
GCGCCCGCCT TCGACAGTTA CGTCTCCCTC GGCGACTCCT TCGTCGCCGG ACCGCTCATC 
CGGGAGGAGA GGGTCAGCAG CAGCATGCCG CTGCTGGGCT GCCTGCGCAC GTCCAACAAC 
TACCCCACGA TGCTCGCCGA GCGGATGGGC GTCACCGACT TCACGGACGC CAGCTGCTCG 
GGCGCGGTCG TCAACGACCT CTACGAGCCG CAGTTCGACG ACACGCCGCC CCAGCTCGAC 
GCCCTGACGC CGGAGACCGA CCTGGTCACG GTCGGGATCG CGGGCAACGA CTTCGGCTTC 
TCCGAGGTGC TCCTGGAGTG CGCCAAGCAG AGTCTGAGCA ACCCGCTGGG CGACCCGTGC 
GCCGAGCACT ACGGCGACGA ACTCGACCAG CGCATCGAGG ACCTGCGGCC GGAGGTCGCG 
GGGGTCTACG CCGACATCGC CGAGCGCAGC CCCGACGCCA CGGTCCTGGC CGTGGGCTAC 
CTCCAGATCC TGCCCGAGAG CAGGGGCTGC TGGCCGAGCA CGCCCATCGC GTGGGGCGAC 
GTGCCCTTCC TGGACCGGGC GCAGACCGCG CTGAACGCGA TGATCGCCGA GGAGGCCGAG 
GCCCAGGGCG CGGTCTACGT GGACGTCTTC GAGCGCGGCC ACGACGTCTG CCAGTCCTCC 
GACACCCGCT GGGTGGAGGG CCTGATCCCC GAGAACGGGG CCCCGGTGCA CCCGAACTAC 
CTCGGTATGC AGGCCACGGC CGACTTCGTG GGAGCCGAGC TGGGGGTCCC CGCGCCCGTG 
GACGACGCCG CGTAA
 
Protein sequence
MPRTSATAAP RSPRRALVPV AVAALSASLV AAPAAAETAQ APAFDSYVSL GDSFVAGPLI 
REERVSSSMP LLGCLRTSNN YPTMLAERMG VTDFTDASCS GAVVNDLYEP QFDDTPPQLD 
ALTPETDLVT VGIAGNDFGF SEVLLECAKQ SLSNPLGDPC AEHYGDELDQ RIEDLRPEVA 
GVYADIAERS PDATVLAVGY LQILPESRGC WPSTPIAWGD VPFLDRAQTA LNAMIAEEAE 
AQGAVYVDVF ERGHDVCQSS DTRWVEGLIP ENGAPVHPNY LGMQATADFV GAELGVPAPV 
DDAA