Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_4924 |
Symbol | |
ID | 9248811 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014211 |
Strand | + |
Start bp | 58856 |
End bp | 59521 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003682813 |
Protein GI | 297563840 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.464248 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACACG CACCCACCCC CACACCGGCG CTGCGGGTCC GCGGCGTCCA CAAGTCCTAC GGCCGCCACC ACGTGCTGCG CGGCGCCGAA CTCGAACTCC CCGAGGCCTG CCTGGCCGGA CTGGTCGGGG AGAACGGCTC CGGCAAGTCC ACCCTGCTGC GCATCCTCTC GGGCGTCCTC GCCCCCGACC GCGGCACCGT CGAGCACCCC GGCAGCCTGG GCTACTGCCC CCAGCACACG GTGCTGAACC CGGCCTTCAC CGTCTCCCAG CACCTGCGCC TCTTCCAGGT CGCGCACGAC CTGCCCGACC TGTCCCGCGC CCGCGAACTC CTCGACGTCC TCGGGTTCGC CGAGTACCTC CACCACCGGG TCTCCACGCT CAGCGGCGGC ACCCGCCAGA AGCTCAACCT CACCCTCGCG CTGATGCACG ACCCGCACCT GCTGCTCCTG GACGAGCCCT ACCAGGGGTT CGACTGGGAC ACCTACGAGC GGTTCTGGCG GCTGGCGGCC GACCTGCGGG ACCGGGGCCG CTCCGTGCTG GTGGTCTCGC ACATCGCCTT CGACACGGTG CGCTTCGACC GCCTGTGGCG GCTGGAGGGC GGGCGTCTGG TGGAGGGGGC GTCCTCGTCG GCGCCCTCGG CCCCCGCGGC GGCGGAGGGC CGGTGA
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Protein sequence | MSHAPTPTPA LRVRGVHKSY GRHHVLRGAE LELPEACLAG LVGENGSGKS TLLRILSGVL APDRGTVEHP GSLGYCPQHT VLNPAFTVSQ HLRLFQVAHD LPDLSRAREL LDVLGFAEYL HHRVSTLSGG TRQKLNLTLA LMHDPHLLLL DEPYQGFDWD TYERFWRLAA DLRDRGRSVL VVSHIAFDTV RFDRLWRLEG GRLVEGASSS APSAPAAAEG R
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