Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_4800 |
Symbol | |
ID | 9248683 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 5687882 |
End bp | 5689828 |
Gene Length | 1947 bp |
Protein Length | 648 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | copper-translocating P-type ATPase |
Protein accession | YP_003682690 |
Protein GI | 297563716 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.832325 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCCGGA CCCGCTTCTG GTGGAGCCTG CTGCTCAGCG TTCCCGTGGT CCTCACCAGC CACATGGTCT CCGGCTGGCT CGGCTACCAG GTCCCCTCCG CGCTGACCTG GGTGCCGCCG GTCCTCGGCA CGGTCGTCTA CCTCTACGGC GGCTGGCCCT TCCTCTCCGG TGTCGTCGGC GAGCTCCGCG AGCGCAGGCC CGGCATGATG ACCCTGGTCG CCATGGCGAT CACCGTCGCC TTCGGCTCCA GCGTGCTCGC CACGTTCGGC GTGGTGGGCA TGGAACTCGA CTTCTGGTGG GAACTGGTCC TGCTGGTCGT GGTCATGCTC CTCGGCCACT GGCTGGAGAT GCGCGCCCTC GGCCAGGCGT CCGGTGCCCT GGAGGCCCTG GCCGCGCTCC TGCCCGACCG CGCCGAGAGG GTCGGCGCCG ACGGCGGGGT CGAGGAGGTG GGCCTCGCCG ACCTGCGCAC CGGCGACACC GTTCTGGTGC GCTCCGGCGG GCGCGTCCCG GCCGACGGCA CCGTGGTCGA GGGCGGCGCC GCCATGGACG AGTCGATGAT CACCGGTGAG TCCCGCGCGG TCACCCGTTC CGAGGGCGAC CGTGTCGTCG CCGGGACCGT CGCCACCGAC TCCGCCGTCC GGGTCCGCGT CGACGCCGTC GGCGAGGACA CGGCCCTGGC CGGTATCCAG CGGCTCGTCA GCGAGGCGCA GGAGTCCCGT TCGCGCTCGC AGGCGCTGGC CGACCGGGCC GCCGCCCTCC TGTTCTGGTT CGCCCTGGTC GCCGCCGTGC TCACGGCCGC CGTGTGGACC CTGTTCGGCG AGGTCACCGA GGCCGTCGAA CGCACCGTGA CCGTCCTGGT CATCGCCTGC CCGCACGCCC TGGGGCTGGC CATCCCGCTG GTCATCGCGA TCTCCACGGC CGTCTCCGCC CGCAACGGCA TCCTGGTCAA GGACCGCATG GCCCTGGAGC GCACCCGCCT CGTGGACACC GTGCTCTTCG ACAAGACCGG CACCCTGACC AAGGGCGCCC CCGCCGTCAC CGACACCTCC GCCGCCTCCG GGCACGCCTC CGAGCGGGTG CTGGCCCTGG CCGGTGCGGT CGAGGCCGAC TCCGAGCACC CGCTCGCCAG GGCGATCGTC CGGGCGGCGC GGGAGACGGG CGCGGTGCCC GCCGCCACCG GCTTCCGGTC GCTGACCGGG CGCGGTGTCC GCGCCTCGGT CGAGGGCTCC GACGTGCAGG TGGGCGGCCC GGCCCTGCTG GAGTCGCTCG GCCTCACCGA GCCGGACGAC CTGGCCGGAC GCACCGGTCC CTGGCGCGAG CGCGGCGCGA CGGTGCTGCA CGTGGTCGTG GACGGCGGGG TGGCCGGTGC CCTGGCGCTG GCCGACGAGG TCCGCCCCGA GTCGGCCGAG GCCGTCCGGC GGCTCCAGGA GCGGGGCGTG CGCGTCGCGA TGGTGACCGG CGACGCCCGC AACGTGGCCG ACGCCGTGGC CGAGCGGCTC GGCCTGGACG AGGTCTTCGC CCAGGTCCTG CCCGACCAGA AGGACGCCGT GGTCCGCGAC CTCCAGTCGA GGGGGAACCG GGTGGCGATG GTCGGCGACG GTGTGAACGA CGCGCCCGCC CTGGCCAGGG CGGACGTCGG CATCGCGATC GGCGCGGGCA CCGACGTGGC GATCGAGTCC GCCGGGGTCG TGCTGGCCTC GGACGACCCG CGCGGCGTGG TGGCGGTCCG CGGGCTGTCG GCGGCCGGTT ACCGAAAGAT GGTGCAGAAC CTCGTGTGGG CCGCCGGGTA CAACGTCGTC GCCGTCCCGC TGGCCGCCGG GGTGCTGGCC CCGGTCGGGA TCGTGCTCGC CCCGGCCGTG GGAGCGGTGC TGATGAGCCT GTCCACGATC ATCGTGGCGC TCAACGCCCA GCTGCTGCGC CGGGTGGACC TGAGCACCTC CTCCTGA
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Protein sequence | MFRTRFWWSL LLSVPVVLTS HMVSGWLGYQ VPSALTWVPP VLGTVVYLYG GWPFLSGVVG ELRERRPGMM TLVAMAITVA FGSSVLATFG VVGMELDFWW ELVLLVVVML LGHWLEMRAL GQASGALEAL AALLPDRAER VGADGGVEEV GLADLRTGDT VLVRSGGRVP ADGTVVEGGA AMDESMITGE SRAVTRSEGD RVVAGTVATD SAVRVRVDAV GEDTALAGIQ RLVSEAQESR SRSQALADRA AALLFWFALV AAVLTAAVWT LFGEVTEAVE RTVTVLVIAC PHALGLAIPL VIAISTAVSA RNGILVKDRM ALERTRLVDT VLFDKTGTLT KGAPAVTDTS AASGHASERV LALAGAVEAD SEHPLARAIV RAARETGAVP AATGFRSLTG RGVRASVEGS DVQVGGPALL ESLGLTEPDD LAGRTGPWRE RGATVLHVVV DGGVAGALAL ADEVRPESAE AVRRLQERGV RVAMVTGDAR NVADAVAERL GLDEVFAQVL PDQKDAVVRD LQSRGNRVAM VGDGVNDAPA LARADVGIAI GAGTDVAIES AGVVLASDDP RGVVAVRGLS AAGYRKMVQN LVWAAGYNVV AVPLAAGVLA PVGIVLAPAV GAVLMSLSTI IVALNAQLLR RVDLSTSS
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