Gene Ndas_4800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4800 
Symbol 
ID9248683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp5687882 
End bp5689828 
Gene Length1947 bp 
Protein Length648 aa 
Translation table11 
GC content75% 
IMG OID 
Productcopper-translocating P-type ATPase 
Protein accessionYP_003682690 
Protein GI297563716 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.832325 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCGGA CCCGCTTCTG GTGGAGCCTG CTGCTCAGCG TTCCCGTGGT CCTCACCAGC 
CACATGGTCT CCGGCTGGCT CGGCTACCAG GTCCCCTCCG CGCTGACCTG GGTGCCGCCG
GTCCTCGGCA CGGTCGTCTA CCTCTACGGC GGCTGGCCCT TCCTCTCCGG TGTCGTCGGC
GAGCTCCGCG AGCGCAGGCC CGGCATGATG ACCCTGGTCG CCATGGCGAT CACCGTCGCC
TTCGGCTCCA GCGTGCTCGC CACGTTCGGC GTGGTGGGCA TGGAACTCGA CTTCTGGTGG
GAACTGGTCC TGCTGGTCGT GGTCATGCTC CTCGGCCACT GGCTGGAGAT GCGCGCCCTC
GGCCAGGCGT CCGGTGCCCT GGAGGCCCTG GCCGCGCTCC TGCCCGACCG CGCCGAGAGG
GTCGGCGCCG ACGGCGGGGT CGAGGAGGTG GGCCTCGCCG ACCTGCGCAC CGGCGACACC
GTTCTGGTGC GCTCCGGCGG GCGCGTCCCG GCCGACGGCA CCGTGGTCGA GGGCGGCGCC
GCCATGGACG AGTCGATGAT CACCGGTGAG TCCCGCGCGG TCACCCGTTC CGAGGGCGAC
CGTGTCGTCG CCGGGACCGT CGCCACCGAC TCCGCCGTCC GGGTCCGCGT CGACGCCGTC
GGCGAGGACA CGGCCCTGGC CGGTATCCAG CGGCTCGTCA GCGAGGCGCA GGAGTCCCGT
TCGCGCTCGC AGGCGCTGGC CGACCGGGCC GCCGCCCTCC TGTTCTGGTT CGCCCTGGTC
GCCGCCGTGC TCACGGCCGC CGTGTGGACC CTGTTCGGCG AGGTCACCGA GGCCGTCGAA
CGCACCGTGA CCGTCCTGGT CATCGCCTGC CCGCACGCCC TGGGGCTGGC CATCCCGCTG
GTCATCGCGA TCTCCACGGC CGTCTCCGCC CGCAACGGCA TCCTGGTCAA GGACCGCATG
GCCCTGGAGC GCACCCGCCT CGTGGACACC GTGCTCTTCG ACAAGACCGG CACCCTGACC
AAGGGCGCCC CCGCCGTCAC CGACACCTCC GCCGCCTCCG GGCACGCCTC CGAGCGGGTG
CTGGCCCTGG CCGGTGCGGT CGAGGCCGAC TCCGAGCACC CGCTCGCCAG GGCGATCGTC
CGGGCGGCGC GGGAGACGGG CGCGGTGCCC GCCGCCACCG GCTTCCGGTC GCTGACCGGG
CGCGGTGTCC GCGCCTCGGT CGAGGGCTCC GACGTGCAGG TGGGCGGCCC GGCCCTGCTG
GAGTCGCTCG GCCTCACCGA GCCGGACGAC CTGGCCGGAC GCACCGGTCC CTGGCGCGAG
CGCGGCGCGA CGGTGCTGCA CGTGGTCGTG GACGGCGGGG TGGCCGGTGC CCTGGCGCTG
GCCGACGAGG TCCGCCCCGA GTCGGCCGAG GCCGTCCGGC GGCTCCAGGA GCGGGGCGTG
CGCGTCGCGA TGGTGACCGG CGACGCCCGC AACGTGGCCG ACGCCGTGGC CGAGCGGCTC
GGCCTGGACG AGGTCTTCGC CCAGGTCCTG CCCGACCAGA AGGACGCCGT GGTCCGCGAC
CTCCAGTCGA GGGGGAACCG GGTGGCGATG GTCGGCGACG GTGTGAACGA CGCGCCCGCC
CTGGCCAGGG CGGACGTCGG CATCGCGATC GGCGCGGGCA CCGACGTGGC GATCGAGTCC
GCCGGGGTCG TGCTGGCCTC GGACGACCCG CGCGGCGTGG TGGCGGTCCG CGGGCTGTCG
GCGGCCGGTT ACCGAAAGAT GGTGCAGAAC CTCGTGTGGG CCGCCGGGTA CAACGTCGTC
GCCGTCCCGC TGGCCGCCGG GGTGCTGGCC CCGGTCGGGA TCGTGCTCGC CCCGGCCGTG
GGAGCGGTGC TGATGAGCCT GTCCACGATC ATCGTGGCGC TCAACGCCCA GCTGCTGCGC
CGGGTGGACC TGAGCACCTC CTCCTGA
 
Protein sequence
MFRTRFWWSL LLSVPVVLTS HMVSGWLGYQ VPSALTWVPP VLGTVVYLYG GWPFLSGVVG 
ELRERRPGMM TLVAMAITVA FGSSVLATFG VVGMELDFWW ELVLLVVVML LGHWLEMRAL
GQASGALEAL AALLPDRAER VGADGGVEEV GLADLRTGDT VLVRSGGRVP ADGTVVEGGA
AMDESMITGE SRAVTRSEGD RVVAGTVATD SAVRVRVDAV GEDTALAGIQ RLVSEAQESR
SRSQALADRA AALLFWFALV AAVLTAAVWT LFGEVTEAVE RTVTVLVIAC PHALGLAIPL
VIAISTAVSA RNGILVKDRM ALERTRLVDT VLFDKTGTLT KGAPAVTDTS AASGHASERV
LALAGAVEAD SEHPLARAIV RAARETGAVP AATGFRSLTG RGVRASVEGS DVQVGGPALL
ESLGLTEPDD LAGRTGPWRE RGATVLHVVV DGGVAGALAL ADEVRPESAE AVRRLQERGV
RVAMVTGDAR NVADAVAERL GLDEVFAQVL PDQKDAVVRD LQSRGNRVAM VGDGVNDAPA
LARADVGIAI GAGTDVAIES AGVVLASDDP RGVVAVRGLS AAGYRKMVQN LVWAAGYNVV
AVPLAAGVLA PVGIVLAPAV GAVLMSLSTI IVALNAQLLR RVDLSTSS