Gene Ndas_4598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4598 
Symbol 
ID9248479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp5453194 
End bp5454477 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content75% 
IMG OID 
ProductN-acylglucosamine 2-epimerase 
Protein accessionYP_003682490 
Protein GI297563516 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00161711 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACACCAT CGACACGACC GGCCCCGGGC CTGCCCGAGT GGCTGCGCGA GGAGGAGCGG 
CGGCTGTACG GCTTCGCCGC GGGATCCGCC GTGTCCGACG GCTTCGGCTG GCTCGACGCG
GACGGGCGTG TGGAGCGGGA CCGGCCCGCC GCCGCCTGGA TCACCGCGCG GATGACGCAC
GTGTTCTCCC TGGCCCACCT GCGGGGGGAG GCCGACGCCG GACGGCTGGC CGACCACGGT
GTGGCGTCCC TGGCGACGGG CCCCCTGCGC GACGCCCGGG ACGGCGGCTG GTTCGACCGG
GTGCCGGACG ACACCGGGGG GAACACTCCC CGGGAGCGCT CCCATGAGCT GCCGCGCAAG
TCGGCCTACG AGCACGCGTT CGTGGTCCTG GCCGCCTCCA GCGCCACCCT CGCCGGTCGC
CCGGGAGCGC GTGAGCTGCT CGACGACGCG CTGCGGGTCG TCGAGGAGCG CTTCTGGGAG
GAGTCCGCGG GCGCCCTGCG CGAGAGCTGG GACAGCGGGT GGACCGCCAC CGAGGACTAC
CGGGGCGCCA ACAGCAACAT GCACGCCGTG GAGGCCTTCC TGGCCGCGGC CGACGCCACC
GGCGACGCCG TGTGGGCCCG CCGCGCGCTC TCCGTCGCCG AACGCCTGAT CCACGGCGTG
GCCGCCGAGC ACGACTGGCG CCTGCCCGAG CACTTCACCT CCGACTGGAA GCCCGTCCCG
GACTACAACC GGGACCGGCC CGACCACCCC TTCCGGCCCT TCGGGAGCAC CACCGGCCAC
CTGCTCGAAT GGGCGCGCCT GCTGGTCCAC CTGGAGGTCG CGCTGAGCCG TGCGGGCGAC
CCCGTCCCCG CGTGGCTGCG CACCGACGCC GAGGCGCTGT TCGACCACGC CGTCCGGCGC
GGCTGGGCCG TCGACGGCGC CGAGGGGTTC GTCTACACCC TCGACTGGCA GGACCGGCCG
GTCGTGCGCG AGCGCATGCA CTGGGTGGTG GCCGAGGCCG CCATGGCAGC CTGGGCGCTG
GGGGAGCACA CCGGCGTGGC CACCTACGCC GACCTGCACG AACGCTGGTG GGCCTACGCC
GACCGGTACC ACGTGGACCG CGAACGCGGC AGCTGGCACC ACGAACTGGA CCCGGACAAC
CGCCCGGCCG CGAGCGTGTG GCCGGGCAAA CCGGACGTCT ACCACGCCTA CCAGGCGGCA
CTCCTGCCCC AGATCGGGCT GTCGGCCTCC ATCGCGGCCG CCCTCCTGCC CGGCACCGAC
CACGACTCCG GAGGAAACGC GTGA
 
Protein sequence
MTPSTRPAPG LPEWLREEER RLYGFAAGSA VSDGFGWLDA DGRVERDRPA AAWITARMTH 
VFSLAHLRGE ADAGRLADHG VASLATGPLR DARDGGWFDR VPDDTGGNTP RERSHELPRK
SAYEHAFVVL AASSATLAGR PGARELLDDA LRVVEERFWE ESAGALRESW DSGWTATEDY
RGANSNMHAV EAFLAAADAT GDAVWARRAL SVAERLIHGV AAEHDWRLPE HFTSDWKPVP
DYNRDRPDHP FRPFGSTTGH LLEWARLLVH LEVALSRAGD PVPAWLRTDA EALFDHAVRR
GWAVDGAEGF VYTLDWQDRP VVRERMHWVV AEAAMAAWAL GEHTGVATYA DLHERWWAYA
DRYHVDRERG SWHHELDPDN RPAASVWPGK PDVYHAYQAA LLPQIGLSAS IAAALLPGTD
HDSGGNA