Gene Ndas_4517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4517 
Symbol 
ID9248397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp5359218 
End bp5360396 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content75% 
IMG OID 
ProductAAA ATPase central domain protein 
Protein accessionYP_003682411 
Protein GI297563437 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.460777 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACAC CAGCCGAACC CGGATCGACC AGCTCCGCGC CGGAGTGGTG GATCTTCCAC 
GGCACAGGTC AGCCCCGCCC GCACCTGGAC CTCGCCGCCC AGCTCCCCCC GCCTCCCCGG
TGGCGCACCT ACGGCGGCGG GCCGGACCCC GACGAAACCG GCGCGGACCC CCCGTTCTAC
GACCCGGGGC CGCGGGCCGG GAGCCCCGCC GCCGAGAGCG AGCGCCACCT GGGCCCCGTC
CGGCCCTGGA GCTTCCCCAT TCCCCTGGGG CCGCACCGCC GCCAGCTGCT GGACAAGGTC
AACGCGGCCA TCTGCCTGCG CCGCCCCCTG CTGCTGGTGG GCCCGCCCGG GATCGGCAAG
TCCAGCCTCG CCCACCAGAT CTCCCGCGAG CTGGGCCTGG GCCGCGTCCT GCGCTGGGCC
GTCACCAGCC GCAGCACCGT GCGCGACGGC CTGTACGCCT ACGACCCCCT CACCCAGATC
CACGACCTCA ACCTGGAGAA CGCCCGCAAC CGGGCCCTGG GCGCCCGGGA CCGCCGCTAC
GCGAGCGCCG ACGGCACGGA GGCCGACGCC CACCTGCGCA GCAGCGCCGA GTCGATCGGC
CGCTACCTCA CCCTGGGACC CCTGGGCACC GCCTTCCTGC CCACCCGGCT GCCCCGCGTG
CTCCTGGTCG ACGACTTCGA CCTGGGCGAC TTCGACCTGC CCGGCGACCT GCTCGACCTG
TTCGAGAACG GCGGCTACAC CGTCCCCGAG CTGGGCCGAC TGGCCAACGT GGCCGGGAGG
ATCCGGGTGG CCACCGACGA CCCCGGCCGT ACGGCGGCGG TCGAACGCGG CGAGGTCCTG
TGCTCGGCCT TTCCCGTCAC GGTGGTGACC TGCAACGACG ACCGGGACCT GCCGCCCGCC
TTCCTGCGCC GCTGCATCCC GGTCCGGATG GGGCTGCCGG ACGAGGACGA GCTGGTGGCC
GCCGTGGCCG GGCACTTCGA CGGCGACCCG CCCACCGGCA CGCGGACCCT GGTCACCGAG
TTCCTGCGCA GGAGCGCCGA CGGCCACGGA CTCGCCGTGG ACCAGCTGCT CAACGCCGTG
CACCTGGTCG GCGCCATGGG ACGGGGCGAG CCGGGGCCCG AGCAGGTCCG CCACCTCTCC
GACCTGCTCT GGCACCGCCT CACGGAAACC CCGGGATGA
 
Protein sequence
MTTPAEPGST SSAPEWWIFH GTGQPRPHLD LAAQLPPPPR WRTYGGGPDP DETGADPPFY 
DPGPRAGSPA AESERHLGPV RPWSFPIPLG PHRRQLLDKV NAAICLRRPL LLVGPPGIGK
SSLAHQISRE LGLGRVLRWA VTSRSTVRDG LYAYDPLTQI HDLNLENARN RALGARDRRY
ASADGTEADA HLRSSAESIG RYLTLGPLGT AFLPTRLPRV LLVDDFDLGD FDLPGDLLDL
FENGGYTVPE LGRLANVAGR IRVATDDPGR TAAVERGEVL CSAFPVTVVT CNDDRDLPPA
FLRRCIPVRM GLPDEDELVA AVAGHFDGDP PTGTRTLVTE FLRRSADGHG LAVDQLLNAV
HLVGAMGRGE PGPEQVRHLS DLLWHRLTET PG