Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_4513 |
Symbol | |
ID | 9248393 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 5351562 |
End bp | 5352947 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_003682407 |
Protein GI | 297563433 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.95033 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCTCCGCA GACTGCTCAC CATCCTGCTC CCCGCCGCGT TCGTCCTGGT CGCCTCGGCG GTCATCCCCC TGGGGGCGGT CATCGCCCAG CAGCTGACCC AGCAGGTCTA CGTCGACCGC CTCGGGGACG CGGGCCGCTT CGCCGCCCTG GCCCGCACCG CGCTGGAGGC CGACCGCACG GAGGCGCTCC TCCAGGAGAT GGCCCGTTAC GAGGCGCTCT ACGGCATCCC GGTGGTCGTG GTGGCCCCCG ACGGAGAGAT CATCGCCGGG TCCGGCAGCA CGGCTCACCA GCGCGACGTG CTCGCGGAAC TGGCCGCGCC GGAGGCCCTC ACCATCGCCC TGGCCGGGGA GCGCCCGGCC CCTCCGACCA CGGTCTGGCC CTGGGAGTCC GACCCCCTCG TGGTCGCCGA GCCCATCGGC CGCGACAGCG AGGTGACGGG GGCGGTCATC GTCGCCGCCC CCACCGACCG GCTCGGCGCC GACATCCTCG GCTCGTGGGG ATGGCTCGCC CTGCTCAGCC TGGTGCCCCT GGCGCTCCTG GTGGCGGCCT CGCTGCCGCT GTCGCGCTGG GTCCTGCGCC CCATCGGCCG ACTCGACGCC GCGACCACCG CCGTCGCCTC GGGGGACCTG GACGTGCGGG TGGACGCCGA GCAGGGACCT CCGGAGCTGC GCCGCCTCAC CGAGTCCTTC AACACGATGG TCGACGTGGT GCGCAGGGCC CTGGAGCGTC AGCGCTCCTT CGTCTCCGAC GCCTCCCACC AGCTGCGCAA CCCCCTGGCG AGCCTGCGCC TGGCGGTGGA GAACCTCGCG CCCTACCTCG GCTCGGAGGA GGCCAGGGAG GCGCACGCCG TGGCCGTGGA CGAGACCACG TTCATGCACC GGATGCTCAA CTCCCTGCTG GCCGCGACGC GCCTGGAGAG CGTCACCGGC ACCGAGGCCG TGGACGTCCC CGAGCTGCTG GAGACCCGGG TGGAGCGCTG GCGCGCCCTG GGCCAGGCCC GGGGGATCAC CGTGACCGTG CACGTCCCCG CCGGGCTGCG GGTCTGCGCC CCGGCCGGGG GCCTGGGCAG CATCCTCGAC GAACTGGTGA GCAACGCCCT GCGCCTGTCC GGGGGGACAC GGGTGCAGGT GCGGGGTTCG GCGGGCGACC CCGCGCGGAT CAGCGTGCTC GACGACGGGG AGGGGCTCCC GGAGGAGGAG CGCGGCGCGG CCCTGGACCG CTTCTGGCGC TCTCCCCGTC ATCAGAACAC CGAGGGGACC GGCATGGGGC TGGCGATCGT CTCCGACCTG GTCCGCGAGG CCGGAGGGGA ACTGGCGCTG GGCGAGGGCC TGCCCGGCGA GCGGCCCGGG TTCGGCGTGA CCATCACGCT GCCGTCGGCG GACTGA
|
Protein sequence | MLRRLLTILL PAAFVLVASA VIPLGAVIAQ QLTQQVYVDR LGDAGRFAAL ARTALEADRT EALLQEMARY EALYGIPVVV VAPDGEIIAG SGSTAHQRDV LAELAAPEAL TIALAGERPA PPTTVWPWES DPLVVAEPIG RDSEVTGAVI VAAPTDRLGA DILGSWGWLA LLSLVPLALL VAASLPLSRW VLRPIGRLDA ATTAVASGDL DVRVDAEQGP PELRRLTESF NTMVDVVRRA LERQRSFVSD ASHQLRNPLA SLRLAVENLA PYLGSEEARE AHAVAVDETT FMHRMLNSLL AATRLESVTG TEAVDVPELL ETRVERWRAL GQARGITVTV HVPAGLRVCA PAGGLGSILD ELVSNALRLS GGTRVQVRGS AGDPARISVL DDGEGLPEEE RGAALDRFWR SPRHQNTEGT GMGLAIVSDL VREAGGELAL GEGLPGERPG FGVTITLPSA D
|
| |