Gene Ndas_4513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4513 
Symbol 
ID9248393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp5351562 
End bp5352947 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content75% 
IMG OID 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_003682407 
Protein GI297563433 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.95033 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCCGCA GACTGCTCAC CATCCTGCTC CCCGCCGCGT TCGTCCTGGT CGCCTCGGCG 
GTCATCCCCC TGGGGGCGGT CATCGCCCAG CAGCTGACCC AGCAGGTCTA CGTCGACCGC
CTCGGGGACG CGGGCCGCTT CGCCGCCCTG GCCCGCACCG CGCTGGAGGC CGACCGCACG
GAGGCGCTCC TCCAGGAGAT GGCCCGTTAC GAGGCGCTCT ACGGCATCCC GGTGGTCGTG
GTGGCCCCCG ACGGAGAGAT CATCGCCGGG TCCGGCAGCA CGGCTCACCA GCGCGACGTG
CTCGCGGAAC TGGCCGCGCC GGAGGCCCTC ACCATCGCCC TGGCCGGGGA GCGCCCGGCC
CCTCCGACCA CGGTCTGGCC CTGGGAGTCC GACCCCCTCG TGGTCGCCGA GCCCATCGGC
CGCGACAGCG AGGTGACGGG GGCGGTCATC GTCGCCGCCC CCACCGACCG GCTCGGCGCC
GACATCCTCG GCTCGTGGGG ATGGCTCGCC CTGCTCAGCC TGGTGCCCCT GGCGCTCCTG
GTGGCGGCCT CGCTGCCGCT GTCGCGCTGG GTCCTGCGCC CCATCGGCCG ACTCGACGCC
GCGACCACCG CCGTCGCCTC GGGGGACCTG GACGTGCGGG TGGACGCCGA GCAGGGACCT
CCGGAGCTGC GCCGCCTCAC CGAGTCCTTC AACACGATGG TCGACGTGGT GCGCAGGGCC
CTGGAGCGTC AGCGCTCCTT CGTCTCCGAC GCCTCCCACC AGCTGCGCAA CCCCCTGGCG
AGCCTGCGCC TGGCGGTGGA GAACCTCGCG CCCTACCTCG GCTCGGAGGA GGCCAGGGAG
GCGCACGCCG TGGCCGTGGA CGAGACCACG TTCATGCACC GGATGCTCAA CTCCCTGCTG
GCCGCGACGC GCCTGGAGAG CGTCACCGGC ACCGAGGCCG TGGACGTCCC CGAGCTGCTG
GAGACCCGGG TGGAGCGCTG GCGCGCCCTG GGCCAGGCCC GGGGGATCAC CGTGACCGTG
CACGTCCCCG CCGGGCTGCG GGTCTGCGCC CCGGCCGGGG GCCTGGGCAG CATCCTCGAC
GAACTGGTGA GCAACGCCCT GCGCCTGTCC GGGGGGACAC GGGTGCAGGT GCGGGGTTCG
GCGGGCGACC CCGCGCGGAT CAGCGTGCTC GACGACGGGG AGGGGCTCCC GGAGGAGGAG
CGCGGCGCGG CCCTGGACCG CTTCTGGCGC TCTCCCCGTC ATCAGAACAC CGAGGGGACC
GGCATGGGGC TGGCGATCGT CTCCGACCTG GTCCGCGAGG CCGGAGGGGA ACTGGCGCTG
GGCGAGGGCC TGCCCGGCGA GCGGCCCGGG TTCGGCGTGA CCATCACGCT GCCGTCGGCG
GACTGA
 
Protein sequence
MLRRLLTILL PAAFVLVASA VIPLGAVIAQ QLTQQVYVDR LGDAGRFAAL ARTALEADRT 
EALLQEMARY EALYGIPVVV VAPDGEIIAG SGSTAHQRDV LAELAAPEAL TIALAGERPA
PPTTVWPWES DPLVVAEPIG RDSEVTGAVI VAAPTDRLGA DILGSWGWLA LLSLVPLALL
VAASLPLSRW VLRPIGRLDA ATTAVASGDL DVRVDAEQGP PELRRLTESF NTMVDVVRRA
LERQRSFVSD ASHQLRNPLA SLRLAVENLA PYLGSEEARE AHAVAVDETT FMHRMLNSLL
AATRLESVTG TEAVDVPELL ETRVERWRAL GQARGITVTV HVPAGLRVCA PAGGLGSILD
ELVSNALRLS GGTRVQVRGS AGDPARISVL DDGEGLPEEE RGAALDRFWR SPRHQNTEGT
GMGLAIVSDL VREAGGELAL GEGLPGERPG FGVTITLPSA D