Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_4355 |
Symbol | |
ID | 9248230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 5189995 |
End bp | 5190783 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | HAD-superfamily subfamily IB hydrolase, TIGR01490 |
Protein accession | YP_003682250 |
Protein GI | 297563276 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.571582 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCACACG ACGCCGTGTC CCCGAACGCG CGCGGGGCCG CCTTCTTCGA CGTGGACAAC ACCCTGATGC GGGGTGCGTC GATCTACCAC TTCGCCCGGG GCCTGGCCTC CCGGGACCTG TTCACCACCC GCGACCTGAT GCGGTTCGCG TGGGGGCAGA CGGTGTTCCG GGTGACCGGC AGCGAGCAGC CCGAGCACAT CAACGCCGCG CGTGAGGCCG CGCTGGCGTT CGTGGCCGGA CACGACGTGA ACGATCTGGT GGCGCTCTGC GAGGAGATCT ACGACGACAC CATGGCCGAC AGGATCTGGG AGGGCACCCG GGCGCTCGTC CAGGGGCACC TGGACGCCGG GCGGCCGGTG TGGCTGGTGA CCGCGACGCC GGTGGAGCTG GCCCAGATCA TCCGGCGGCG GCTGGGCCTG ACCGGTGCTC TGGGCACCGA GGCCGAGTGC GTCGACGGGG TGTACACGGG ACGGTTGAAC GGGGACCTGC TGCACGGTCC GGCCAAGGCC GTGGCGGTGC GCGCCCTCGC CCACAGGGAG GGGTGGGACC TGGCGTCCTG CTCCGCCTAC AGCGACTCCT CCAACGACCT GCCGCTGCTG TCCCTGGTGG GGCGTCCGCA CGCGGTCAAC CCGGACACCG ACCTGCGCAG GTACGCCCGC ACGCACGGGT GGCCGGTGCA CGACTTCCGG CGGCACCGGA ACGCGCTGCG GGTGGCCGTC CCGGCCGCCG TGGGCGCGGT CGCCGGTGCC GTGGCGCTGC GCGCGGTCAG ACAGAGACGG ACCGGCTGA
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Protein sequence | MSHDAVSPNA RGAAFFDVDN TLMRGASIYH FARGLASRDL FTTRDLMRFA WGQTVFRVTG SEQPEHINAA REAALAFVAG HDVNDLVALC EEIYDDTMAD RIWEGTRALV QGHLDAGRPV WLVTATPVEL AQIIRRRLGL TGALGTEAEC VDGVYTGRLN GDLLHGPAKA VAVRALAHRE GWDLASCSAY SDSSNDLPLL SLVGRPHAVN PDTDLRRYAR THGWPVHDFR RHRNALRVAV PAAVGAVAGA VALRAVRQRR TG
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