Gene Ndas_4272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4272 
Symbol 
ID9248146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand- 
Start bp5085976 
End bp5087187 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content76% 
IMG OID 
ProductBeta-ketoacyl synthase 
Protein accessionYP_003682167 
Protein GI297563193 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.278476 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGG TCATCACCGG ACTCGGCACG GTCTCACCCG CCGGGGTGGG CGTCCCGGAG 
TACTGGGAGG CGGTCCGGGA GGGGCGATCG CTCCTCGCGC CGATCCCCGA CTTCGACACC 
GACGGCTTCC ACGTGCGCGT GGGCGGGAAG ATCCCCGGCT TCGACCCGCA CGACCACCTC 
GACGGCCGCT ACGTCGTCCA GACCGACGCC TTCAGCTGGT TCGCGATGGT CGCGGCCGGC 
GAGGCCCTGC GCGACTCGGG GCTGGACCCC GCCGCCGACC CCTACGCGGT CGGCGTGCTG 
ATCTGCAGCT GCACGGGCGG CGTGGAGTTC GGCCAGCGCG AGATCGAGGC CCTGTGGAGC 
AGGGGCCCCG ACCACGTCGG CCCCTACCAG TCCATCGCCT GGTTCTACGC GGCGAGCACC 
GGACAGATCT CCATCAGCAA CGGCCTCAAG GGCATGTGCG GGGTGCTGGT CACCGACGAG 
CCGGGCATGC TCGACGCCCT GGGCCAGAGC GAACGGGCCC TGCGGCGCGG GACCTCCGCG 
ATGCTGGTCG GCGGAAGCGA GGCCCCGATC GGCTCCCCGT TCGCACTGGC CTGCCACGCG 
GGCGCCGAGG TCCTCAGCCG CGGCGAGGAC CCCCGCACGG CCTACCTCCC CTTCACCGAG 
GGGGCGGCCG GCCACGTCCC GGCCGAGGGC GCGGCCGTCG CCGTGGTGGA GGACGAGGCC 
GCCGCGCGGG CGCGCGGCGC CAGGATCCGG GCCCGGGTCG CGGGGCACGC GAGCACCTTC 
GGCGGGGTCG GATCGTTCGA CCCGGGCGGT GCCGGACTCC TGCACGCGGC CCGGGAGGCG 
ATGCGCCGGG CCGCCGTCGC CCCCGAGGAC GTGGACGTGG TCTTCGCCGA CGCGGTGGGC 
ACGCCCAAGG CCGACGCCGA CGAGGCCGCC GTGCTGCGCG AGCTGTTCCC CGGCGGGGTG 
GCCGTCACCG CGCCCAAGAC CGGCTTCGGA CGCGCCTACG CCGGGTCGGG CGCGCTGGAC 
GTGGCCGCCG CCGTCCTGAG CCTGGAACAC CAGGTCGTAC CGCCCACACC CAACGTCCCC 
GACGCGCCCA GCGGACTGGA CCTGGTCGTG CGGGTGCCGC GCGCCGCGCG CCTGCGCACC 
GCGCTGGTCC TGTCGCGCGG CCTGGGCGGC GGCAACTCCG CCGTCGTCCT GACCCGCCCC 
GACCCGGTCT GA
 
Protein sequence
MSTVITGLGT VSPAGVGVPE YWEAVREGRS LLAPIPDFDT DGFHVRVGGK IPGFDPHDHL 
DGRYVVQTDA FSWFAMVAAG EALRDSGLDP AADPYAVGVL ICSCTGGVEF GQREIEALWS 
RGPDHVGPYQ SIAWFYAAST GQISISNGLK GMCGVLVTDE PGMLDALGQS ERALRRGTSA 
MLVGGSEAPI GSPFALACHA GAEVLSRGED PRTAYLPFTE GAAGHVPAEG AAVAVVEDEA 
AARARGARIR ARVAGHASTF GGVGSFDPGG AGLLHAAREA MRRAAVAPED VDVVFADAVG 
TPKADADEAA VLRELFPGGV AVTAPKTGFG RAYAGSGALD VAAAVLSLEH QVVPPTPNVP 
DAPSGLDLVV RVPRAARLRT ALVLSRGLGG GNSAVVLTRP DPV