Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_4122 |
Symbol | |
ID | 9247996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 4922580 |
End bp | 4924739 |
Gene Length | 2160 bp |
Protein Length | 719 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | CoA-binding domain protein |
Protein accession | YP_003682023 |
Protein GI | 297563049 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCGCCT ACACCCCCGA CCGCCCCGAC CACGACCGCG CCGCGGTCCG CGAGGTGCTC GACCGCGCCA GGGCCGAGGG CAGGACCGCC CTGACCGCCC CCGAGGGCCG CGTCCTGGCC GACGCCTACG GCATCCCCGT CCCGGGCGAG GACCTGGCGC ACTCCGCCGA GGAGGCCGCC GAACTCGCCG GTGAGCTCGG CCTGCCGGTC GTGGCCAAGA TCGTCTCCCC CGACATCCTG CACAAGACCG ACGCGGGCGG CGTCGAGGTC GGCCTGGACA GCGCCGAGAA GGTCGCCGAG GCCTACCACC GCATCACCGC CAACGCCCTG GCCCACACCC CGGGGGCGCG CATCGACGGG GTCCAGATCC AGCAGCAGGT CGGCGGCGGG CCGGAGGTCG AGGTCCTCGT CGGCGCGACC ACCGACCCCA CCTTCGGCAA GATCGTGGTC TTCGGGCTGG GCGGCGTCCT GGTCGAGGTG CTGCGCGACG TCACCTTCCG GATGGCCCCG GTCTCCCGCG AGGAGGCGCT GACCCAGATC GACGACATCC GCGCGGCCGA GGTCCTGCGC GGCGTGCGCG GCCGCCCCGC CGTGGACCGG GAGCGGCTGG CCGACGTGGT CAGCAGGCTG TCGGACCTGG TCACCGACTT CCCCGAGATC GCCGAGGCCG ACCTCAACCC GGTCTTCGCC GGACCGGCCT CCGCCGTGGC CGCGGACCTG CGCTTCGTCC TGGACTTCGC GCCGCCCGAG CCGCCCGCGC GGTTCGAACG CGACGAGATC CTCGCCGCGA TGAACCGGGT CTTCAAGCCG CGGTCGATCG CGATCGTCGG CGCCTCCAAC GAGCCCGGCA AGATCGGCCA CTCCGTCATC AAGAACATCG TCGACGGCGG GTACGCGGGC GAGGTCTACC CGGTCAACCC CAAGTCCCCC GAGGTGTACG GCCGCACGGC CTACGCCAGC GTCCTCGACA TCCCCGGCGA GGTCGACGTG GCGGTCTTCG CGATCCCCGC CAAGTTCGTG GCGGGCGCGC TGGAGGAGGT CGGCACGAAG GGGGCCGCCG CGGCGGTCCT CATCCCCTCC GGGTTCGCCG AGACCGGCGA GCAGGAGCTC CAGGACGAGG TGCTCGCCGT CGCCCGCAGG CACGGCGTGC GCCTGCTCGG CCCCAACATC TACGGCTACT ACTACACGCC CGAGAAGCTG TCGGCGACCT TCTGCACCCC CTACGACGTC AGCGGAGGCA CCGCCCTGAC CTCGCAGTCG GGCGGGATCG GCATGGCCAT CCTCGGCTAC AGCCGCAGCA CGAGCACCGG CGTCTCGGCC ATCGTCGGCG TCGGCAACAA GGCCGACATC GACGAGGACG ACCTGCTCAC CTTCTTCGGC CAGGACGAGA ACACCAACGC CGTCGCCATG CACCTGGAGG ACCTCAAGGA CGGCCGCGCC TTCGTCGAGG CCGCCCGCGA GGTCGTGCCG CACAAGCCCG TCATCGTGCT CAAGGCCGGG CGCACCGACG CCGGGGCGCG CGCGGCCGGG TCGCACACCG GCGCGCTGGC GGGCGACGAC AAGGTCTACG ACGACATCCT GCGCCAGGCG GGCGTGGTCC GGGCCCCCGG GCTCAACGAG CTGCTGGAGT TCGGCCGCGC GCTGCCGGTC CTGCCCACCC CCAAGGGCGA GAACGTCGTC ATCATCACCG GCGCGGGCGG ATCGGGCGTG CTGCTCTCCG ACGCGGTGGT GGACAACGGG ATGAGCCTCT ACGAGATCCC GCCGGACCTG GACGCCTCGT TCCGGGCCTT CATCCCGCCC TTCGGCGCCG CCGGGAACCC GGTGGACATC ACCGGCGGCG AGCCGCCCTC CACCTACGAG GCCACGATCC GCCTGGGCCT GGAGGACGAG CGGGTGCACG CGCTCATCCT GGGCTACTGG CACACCATCA TCACGCCGCC GATGGTCTTC GCGAAGGTGG TCGCCGACGT GGTGGCCGAG GCCAGGGCCA AGGGGATCGA CAAGCCCGTG GTCGCCTCGC TCTCGGGTGA CACCGAGGTC GAGGAGGCCT CCCGGTACCT GTTCGACCAC GGCGTCGTGG CCTTCCCCTA CACCACCGAG AAGCCCGTGC AGATTCTCGG CGCGAAGTAT CGCTGGGCCC GCGCCGCGGG ACTACTCTGA
|
Protein sequence | MAAYTPDRPD HDRAAVREVL DRARAEGRTA LTAPEGRVLA DAYGIPVPGE DLAHSAEEAA ELAGELGLPV VAKIVSPDIL HKTDAGGVEV GLDSAEKVAE AYHRITANAL AHTPGARIDG VQIQQQVGGG PEVEVLVGAT TDPTFGKIVV FGLGGVLVEV LRDVTFRMAP VSREEALTQI DDIRAAEVLR GVRGRPAVDR ERLADVVSRL SDLVTDFPEI AEADLNPVFA GPASAVAADL RFVLDFAPPE PPARFERDEI LAAMNRVFKP RSIAIVGASN EPGKIGHSVI KNIVDGGYAG EVYPVNPKSP EVYGRTAYAS VLDIPGEVDV AVFAIPAKFV AGALEEVGTK GAAAAVLIPS GFAETGEQEL QDEVLAVARR HGVRLLGPNI YGYYYTPEKL SATFCTPYDV SGGTALTSQS GGIGMAILGY SRSTSTGVSA IVGVGNKADI DEDDLLTFFG QDENTNAVAM HLEDLKDGRA FVEAAREVVP HKPVIVLKAG RTDAGARAAG SHTGALAGDD KVYDDILRQA GVVRAPGLNE LLEFGRALPV LPTPKGENVV IITGAGGSGV LLSDAVVDNG MSLYEIPPDL DASFRAFIPP FGAAGNPVDI TGGEPPSTYE ATIRLGLEDE RVHALILGYW HTIITPPMVF AKVVADVVAE ARAKGIDKPV VASLSGDTEV EEASRYLFDH GVVAFPYTTE KPVQILGAKY RWARAAGLL
|
| |