Gene Ndas_3987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3987 
Symbol 
ID9247858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand- 
Start bp4769300 
End bp4769965 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content71% 
IMG OID 
Productpeptidyl-tRNA hydrolase 
Protein accessionYP_003681890 
Protein GI297562916 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.819406 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAACT GGTGGGGCAG GCTGTTCGGC GGCAGGGGCC CCGGCGCGCG GAGCGCCGGG 
GGCACAAGCG TCGGCGGAGA GAACGAGGAC ATGGCCGATA CCGAGCGCTG GCTCGTCGTG 
GGGCTGGGCA ATCCCGGGCC CAAGTACGCC GGGAACAGGC ACAACGCCGG GTTCCTGGTG 
GTGGAGGCGC TCGCGGGCGG CGAGCGCTGG AAGGCGCACA AGGCGCACGC GGAGGTGGTG 
GAGACCCGCC TGGACGGCGT CCCCGTGGTG CTGGCCAAGC CGCGGAGCTT CATGAACCTG 
TCGGGCGGCC CGGTCTCCGG TCTGGCCCGC TTCTACAAGG TCCCGGTCGA GCGGATCGTC 
GTGGTGCACG ACGAGATGGA CATCGACTTC GGCGCGCTCA AGCTCAAGAA GGGCGGCGGG 
CCGGGCGGGC ACAACGGCCT GAAGTCGATG ACCTCGTCCC TGTCCAGCCC GGACTACATC 
CGCGTGCGCT TCGGGGTGGG CCGTCCGCCG GGCCGGATGG ACCCGGCCGC GTACGTGCTC 
AAGGACTTCT CCTCCACCGA GCGCGCCGAG CTGGACCTCA ACGTCGAACG CGCCGCCGAC 
GCGGTGCGCA CGGTGCTCAC CGAAGGCCTG GGCCGGGCGC AGAACATCTA CCACACCGCC 
GCCTGA
 
Protein sequence
MGNWWGRLFG GRGPGARSAG GTSVGGENED MADTERWLVV GLGNPGPKYA GNRHNAGFLV 
VEALAGGERW KAHKAHAEVV ETRLDGVPVV LAKPRSFMNL SGGPVSGLAR FYKVPVERIV 
VVHDEMDIDF GALKLKKGGG PGGHNGLKSM TSSLSSPDYI RVRFGVGRPP GRMDPAAYVL 
KDFSSTERAE LDLNVERAAD AVRTVLTEGL GRAQNIYHTA A