Gene Ndas_3972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3972 
Symbol 
ID9247843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp4751612 
End bp4752070 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content71% 
IMG OID 
ProductOligosaccharide biosynthesis protein Alg14 like protein 
Protein accessionYP_003681875 
Protein GI297562901 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0465907 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCCAC GACCGGTTCT CCTGGTGGCC TCCAGCGGAG GGCACCTGGC CCAGCTGTGC 
TCACTGCGTC CGTGGTGGCG GCACCGCGAG CGCGTGTGGG TGACCTTCCG GACCCCCGAC
GCCGAGTCCG CCCTGACCGG CGAGCGCGTC CGTTGGGCCT TCCACCCCAC CACCCGCCAC
GTGGGCAACC TGCTGCGCAA CGCCTGGCTG GCCGTGCGCG TCCTGCGCGA ACGGCGCCCG
TGCGCCGTAG TCACCACCGG CGCCGGGGTG GCGCTGCCCT TCTTCGCCCT GGCGTGGCTG
CTGCGGATAC CGACCGTCTA CATCGAGGTC TACGACCGCC TCGACACACC GACGCTCACC
GCACGGCTGT GCCGTCCGTT CACCCGGCTG TTCCTCGCCC AGTGGGAGGA ACAGCGCGCC
TTCATGCCGA CCGCCATCAC GGTAGGACCG CTGCTTTGA
 
Protein sequence
MSPRPVLLVA SSGGHLAQLC SLRPWWRHRE RVWVTFRTPD AESALTGERV RWAFHPTTRH 
VGNLLRNAWL AVRVLRERRP CAVVTTGAGV ALPFFALAWL LRIPTVYIEV YDRLDTPTLT
ARLCRPFTRL FLAQWEEQRA FMPTAITVGP LL