Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_3922 |
Symbol | |
ID | 9247793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 4693831 |
End bp | 4695777 |
Gene Length | 1947 bp |
Protein Length | 648 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | succinate dehydrogenase or fumarate reductase, flavoprotein subunit |
Protein accession | YP_003681825 |
Protein GI | 297562851 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCTGACA ACGACTTCTA CCGCGTCGGC GACCCGATCC GGGACGAGAA GGCCCCCGAG GGCCCGATCA ACGAGCGCTG GGACAAGCGG CGCTTCTCGG CCAAGCTGGT CAACCCCGCG AACCGGCGCA AGCTCTCGGT GATCATGGTG GGCACCGGCC TGGCCGGCGC CTCCGCGGCC GCGACCCTGG GCGAGGCGGG CTACAAGGTC ACCTCGTTCT GCTACCAGGA CAGCCCGCGC CGCGCGCACT CCATCGCGGC CCAGGGCGGC ATCAACGCCG CCAAGAACTA CCGCAATGAC GGCGACAGCA TCTACCGGCT GTTCTACGAC ACCGTCAAGG GCGGCGACTT CCGCTCCCGC GAGTCGAACG TCTACCGCCT GGCCCAGACC AGCGTCGAGA TCATCGACCA GTGCGTCGCC CAGGGCGTGC CCTTCGCCCG CGAGTACGGC GGCCTGCTCG ACAACCGCTC CTTCGGCGGC GTGCAGGTCT CGCGTACGTT CTACGCGCGC GGCCAGACGG GGCAGCAGCT GCTCATCGGC GCCTACCAGG CCCTGGAGCG CCAGATCGCG GCGGGCAGCG TCAAGATGCA CACCCGCCAC GAGATGCTGG AGGTCATCGT CGTGGACGGC CGCGCGCGCG GCGTCATCGT CCGCGACATG GTCACCGGTG AGATCGAGAC GCACTTCGCC GACGCCGTGG TGCTGGCCAC CGGCGGCTAC GGCAACGTGT TCTTCCTGTC CACCAACGCG ATGGGCTCGA ACGTCACCGC GACCTGGCGC GCGCACCGCA AGGGAGCGCT CTTCGCCAAC CCGTGCTACA CGCAGATCCA CCCGACCTGC ATCCCGGTCA GCGGCGACTA CCAGTCCAAG CTGACCCTGA TGAGCGAGTC GCTGCGCAAC GACGGCCGCA TCTGGGTGCC CAAGGCGCAC GGGGACACCC GCGACCCGCG CCAGATCCCG GAGGAGGAGC GCGACTACTA CCTGGAGCGC ATCTACCCGG CCTTCGGCAA CCTGGTGCCG CGCGACATCG CCTCCCGCGC CGCCAAGAAC GTCTGCGACG AGGGCCGCGG CGTGGGCCCC GGCGGTCTGG GCGTCTACCT GGACTTCGCC GACGCCATCG CGCGCATGGG GCAGGACGCC GTCGAGGCCA AGTACGGCAA CCTGTTCGAC ATGTACCAGC GCATCACCGG CGAGAACCCG TACGAGGTTC CGATGCGCAT CTACCCGGCC GTGCACTACA CCATGGGCGG TCTGTGGGTC GACTACGACC TCCAGAGCTC CATCCCGGGC CTGTTCGTGA CCGGTGAGGC CAACTTCTCC GACCACGGCG CCAACCGCCT GGGCGCGAGC GCGCTGATGC AGGGGCTGGC GGACGGCTAC TTCGTCCTGC CCAACACCAT CAACGACTAC CTGTCGTCGG GCCCGTTCGA GGCCCTCGAC GAGTCGCACC CCGAGGCCGT GGCGGCCAAG GAGCAGGTGA CCTCCCGCAT CGACAAGCTG CTCTCCGTCC AGGGCTCCCG CACCGTCGAC TCCTTCCACA AGGAGCTCGG CCACATCATG TGGGAGTACT GCGGCATGGA GCGCAGTGAG GAGGGCCTGA CCAAGGCCAT CGAGCTCATC CGGGCGCTGC GCGCCGAGTT CTGGCGCGAC GTCAAGGTGC TGGGAACCAA CGAGGAGTTC AACCAGGCCC TGGAGAAGGC CAACCGCGTG GCCGACTTCC TGGAGCTGGG CGAGCTCATG TGCATCGACG CCCTGCACCG CCGCGAGTCC TGCGGCGGCC ACTTCCGCGC CGAGAGCCAG ACCGAGGACG GCGAGGCGCT GCGTCACGAC GACGAGTTCG CCTACGTGGC CGCCTGGGCG TTCGGCGGCG ATGACAGCAA GCCCGTGCTC CACAAGGAAG CCCTGGAGTA CGAGTACGTC GAGATGAAGC AGCGGAGCTA CAAGTGA
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Protein sequence | MSDNDFYRVG DPIRDEKAPE GPINERWDKR RFSAKLVNPA NRRKLSVIMV GTGLAGASAA ATLGEAGYKV TSFCYQDSPR RAHSIAAQGG INAAKNYRND GDSIYRLFYD TVKGGDFRSR ESNVYRLAQT SVEIIDQCVA QGVPFAREYG GLLDNRSFGG VQVSRTFYAR GQTGQQLLIG AYQALERQIA AGSVKMHTRH EMLEVIVVDG RARGVIVRDM VTGEIETHFA DAVVLATGGY GNVFFLSTNA MGSNVTATWR AHRKGALFAN PCYTQIHPTC IPVSGDYQSK LTLMSESLRN DGRIWVPKAH GDTRDPRQIP EEERDYYLER IYPAFGNLVP RDIASRAAKN VCDEGRGVGP GGLGVYLDFA DAIARMGQDA VEAKYGNLFD MYQRITGENP YEVPMRIYPA VHYTMGGLWV DYDLQSSIPG LFVTGEANFS DHGANRLGAS ALMQGLADGY FVLPNTINDY LSSGPFEALD ESHPEAVAAK EQVTSRIDKL LSVQGSRTVD SFHKELGHIM WEYCGMERSE EGLTKAIELI RALRAEFWRD VKVLGTNEEF NQALEKANRV ADFLELGELM CIDALHRRES CGGHFRAESQ TEDGEALRHD DEFAYVAAWA FGGDDSKPVL HKEALEYEYV EMKQRSYK
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