| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_3909 |
|---|
| Symbol | |
|---|
| ID | 9247780 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | + |
|---|
| Start bp | 4681079 |
|---|
| End bp | 4683277 |
|---|
| Gene Length | 2199 bp |
|---|
| Protein Length | 732 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | peptidase S9 prolyl oligopeptidase active site domain protein |
|---|
| Protein accession | YP_003681812 |
|---|
| Protein GI | 297562838 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTTTC CTCGCCAACA GGCCCGCACG CAGCGCTTCT CGATCGGTGT CCCCCGCGCG
TTCCAGATCT CACCGGACGG ACGGCGCGTC GCCTTCCTCC GGGGGCGCGA CGGGGTGGAC
AAGGCCACCT GCCTGTGGGT GCACGACACG GAAGGGGCGG GAACGGACAC GGTGGTCGCC
GACCCCCGCT CCCTGGGCGC CGACGACGAG AACCTTCCGC CCGAGGAGCG GGCCCGCCGC
GAGCGGCTGC GCGAGAGCGG CGGCGGGATC GTGTCGTACT CGGTGGACGA GGCGTTCACC
CGCGCGGTGT TCACCCTGTC CGGACGGCTG TTCTACGTCG ACCTGGTCGG CGACGACACC
GCTCCGCGCG AACTGCCCGC CGCCACCCCC GTCGTGGACC CGCGCATCAG CCCGGCGGGT
GACCGGGTCG CCTACGTCAG CGGCGGCGCG GTGCGCGTCC TGGACATCGC CGCCGCCGAA
CCGGACCACG GCGACCGCCC GGTGGTCGAA CCGGACGGCC CCGACGTCAC GTGGGGCCTG
GCCGAGCTGG TGGCCGCCGA GGAGATGGGG CGCTACCGGG GCTTCTGGTG GGCTCCGGAC
GGCTCCGCGC TCGCCGTCGC GCGCGTGGAC GAGTCCGGGG TGAACACCTG GTACGTCTCC
GACCCCGGCA ACCCCGCCCA GGAGCCGACG GCCCTGCGCT ACCCGCCCGC GGGCGGCGCC
AACGCCGACG TGCGCCTGGC CGTGTTCCGG GTCGGCCCGC GCGGGGACGG GCGGCCCGAA
CCGGTCTGGG TCGAGTGGGA CCGCGAGGCC CTGCCCTATC TGGCCACGGT CGGGTGGACG
ACCGGGCCGG ACGGCACACC GACCGTGGTG TTCACCGCGC AGAGCCGCGA CCAGCGCACG
CTGACCCTGT TCAGCGCCGA TCCCGCGACC GGCCTGGTGG TGGAGTCGCG CACCGAGTCC
GACGGCGTGT GGGTCGAGCT GATGCCGGGC GTGCCCGCCT TCACCGGTGC GGGCGACCTG
GTGTGGATCG GCCGCGAGGC CGGGGGCGAG CGCCGGGTCT ACGTCGGCGA CGCCCCGGTC
AGCCCCCCGG ACGTGTACGT GCGCGGCGTG GTGGACGTGG ACGGCGACCG GCTCCTGTAC
TCGGGGTCGC CCGCCGGGAG CCCCGGGGAC GTGTCGCTGT GGCTGGTCGA GCTGGGCACG
GGCCTGGCCG CGCCGGTGGA GGTGCCCGGG CACGGGTGCA GCAGGTCCGC GGACTCGGGC
GCGCACAGCG GTCTGCGCTC GGGGCGGCTG CGCGGTGACA CGCTGGTGGT GCAGCACCGG
TCGATGGACT TCCCGGGCGC GCACACGGTG GTGCTGCGCG GCGCCGGTAC CGAGACGCGC
CGGTCCTGCT CGGAGATCGA GAGCCTGGCC GAGGCCCCGG ACCTGCCGGA GCCGCGCGTG
GAGTTCTGGC GCGCCGGTGA GCGCCGTATC CCGAGCGCCC TGGTGCTGCC GTCCTGGTAC
CGGGAGGGGC TGCGTCCGCT GCCGGTGCTG ATGGCGCCCT ACGGCGGCCC GCACGCCCAG
CGGGTGCTCA ACGCGCGCGG GGCGTACCTG ACCGCCCAGT GGTACGCCGA ACAGGGGTTC
GCGGTGCTGA TCGCGGACGG CCGGGGCACC CCGGGCCTCG GGGTGGAGTG GGAGCAGAGC
GTCCACCTCG ACCTGGCCGC GCCGGTCCTG GAGGACCAGG TGGCGGCGCT GGAGGACGCG
GCGGAGCGGT TCGACTTCCT GGACGTGTCG CGGGTGGGCA TCCACGGCTG GTCGTTCGGC
GGCTACCTGG CGGCGCTGGC GGTGCTGCGC CGCCCGGACG TGTTCCACGC GGCGGTGGCG
GGCGCGCCGG TCATCGACTG GGAGCTGTAC GACACCCACT ACACCGAGCG CTACCTGGGC
ACCCCCGGGG ACGAGCCGGA GGCCTACGGG CGCAGCTCGC TCCTGGCGGA GGCGGCCAAG
CTGGAGCGCC CGCTGATGAT GATCCACGGA CTGGCGGACG ACAACGTGGC CTTCGCGCAC
ACGCAGCGGA TGTCGTCGGC GCTGATGGCG GCGGGGCGCC CGCACACGGT GCTGCCGCTG
TCGGGGGTGA CGCACTCGCC CTCGGACCCG ACGGTCGCGG AGAACCTGAT GCTGCTCCAG
GTGGAGTTCC TCAAGGAGAA CCTGCGCGGC GAGGGGTAG
|
|---|
| Protein sequence | MSFPRQQART QRFSIGVPRA FQISPDGRRV AFLRGRDGVD KATCLWVHDT EGAGTDTVVA
DPRSLGADDE NLPPEERARR ERLRESGGGI VSYSVDEAFT RAVFTLSGRL FYVDLVGDDT
APRELPAATP VVDPRISPAG DRVAYVSGGA VRVLDIAAAE PDHGDRPVVE PDGPDVTWGL
AELVAAEEMG RYRGFWWAPD GSALAVARVD ESGVNTWYVS DPGNPAQEPT ALRYPPAGGA
NADVRLAVFR VGPRGDGRPE PVWVEWDREA LPYLATVGWT TGPDGTPTVV FTAQSRDQRT
LTLFSADPAT GLVVESRTES DGVWVELMPG VPAFTGAGDL VWIGREAGGE RRVYVGDAPV
SPPDVYVRGV VDVDGDRLLY SGSPAGSPGD VSLWLVELGT GLAAPVEVPG HGCSRSADSG
AHSGLRSGRL RGDTLVVQHR SMDFPGAHTV VLRGAGTETR RSCSEIESLA EAPDLPEPRV
EFWRAGERRI PSALVLPSWY REGLRPLPVL MAPYGGPHAQ RVLNARGAYL TAQWYAEQGF
AVLIADGRGT PGLGVEWEQS VHLDLAAPVL EDQVAALEDA AERFDFLDVS RVGIHGWSFG
GYLAALAVLR RPDVFHAAVA GAPVIDWELY DTHYTERYLG TPGDEPEAYG RSSLLAEAAK
LERPLMMIHG LADDNVAFAH TQRMSSALMA AGRPHTVLPL SGVTHSPSDP TVAENLMLLQ
VEFLKENLRG EG
|
|---|
| |