Gene Ndas_3701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3701 
Symbol 
ID9247570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp4439888 
End bp4440562 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content68% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003681605 
Protein GI297562631 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAACAGG GCCAGGAGCA GGAGACAGCC GAGGAACGGG AAGAGCGCTT CGAGAGGGAC 
GTGCTTCCCT TCCTCGACCA GCTCTACTCC GCGGCGCTGC GGATGACCCG TAACCCCGCC
GACGCGGAGG ATCTCGTACA GGAGACCTTC GCCAAGGCGT TCGGTTCGTT CCACCAGTTC
AGACAGGGAA CGAACCTCAA GGCGTGGCTC TACCGCATCC TCACCAACAC CTTCATCAAC
TCCTACCGCA AGAAGCAGCG CGAACCGAAG CAGGCGGGGA CCGAGGACGT CGAGGACTGG
CAGCTGGCGC AGGCCGCGTC GCACACCGCG GCGGGCCTGA AGTCGGCTGA GGCCGAGGCG
CTCGAACACC TCCCCGACAC CGACGTCAAA CGGGCGCTCC AGGAGCTGCC CGAGGACTTC
CGGATCGCGG TGTACCTCGC CGATGTCGAG GGCTTCGCGT ACAAGGAGGT CGCCGAGATC
ATGGGGACGC CCATCGGGAC GGTCATGTCC CGGCTGCACC GCGGGCGCCG CCAGCTCAGG
TCGATGCTGG AGGAGTACGC GGTGGAGCGG GGGTTCCTGC CGGCGCGGGC GGCGGCCGAG
GCCGGCGCGG TCGCCTCGGG GACGTCCCCG CGCGGACGGG GACAGGACGT CTCGGATCGA
GGAGACCGGC AATGA
 
Protein sequence
MEQGQEQETA EEREERFERD VLPFLDQLYS AALRMTRNPA DAEDLVQETF AKAFGSFHQF 
RQGTNLKAWL YRILTNTFIN SYRKKQREPK QAGTEDVEDW QLAQAASHTA AGLKSAEAEA
LEHLPDTDVK RALQELPEDF RIAVYLADVE GFAYKEVAEI MGTPIGTVMS RLHRGRRQLR
SMLEEYAVER GFLPARAAAE AGAVASGTSP RGRGQDVSDR GDRQ