Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_3701 |
Symbol | |
ID | 9247570 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 4439888 |
End bp | 4440562 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003681605 |
Protein GI | 297562631 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGAACAGG GCCAGGAGCA GGAGACAGCC GAGGAACGGG AAGAGCGCTT CGAGAGGGAC GTGCTTCCCT TCCTCGACCA GCTCTACTCC GCGGCGCTGC GGATGACCCG TAACCCCGCC GACGCGGAGG ATCTCGTACA GGAGACCTTC GCCAAGGCGT TCGGTTCGTT CCACCAGTTC AGACAGGGAA CGAACCTCAA GGCGTGGCTC TACCGCATCC TCACCAACAC CTTCATCAAC TCCTACCGCA AGAAGCAGCG CGAACCGAAG CAGGCGGGGA CCGAGGACGT CGAGGACTGG CAGCTGGCGC AGGCCGCGTC GCACACCGCG GCGGGCCTGA AGTCGGCTGA GGCCGAGGCG CTCGAACACC TCCCCGACAC CGACGTCAAA CGGGCGCTCC AGGAGCTGCC CGAGGACTTC CGGATCGCGG TGTACCTCGC CGATGTCGAG GGCTTCGCGT ACAAGGAGGT CGCCGAGATC ATGGGGACGC CCATCGGGAC GGTCATGTCC CGGCTGCACC GCGGGCGCCG CCAGCTCAGG TCGATGCTGG AGGAGTACGC GGTGGAGCGG GGGTTCCTGC CGGCGCGGGC GGCGGCCGAG GCCGGCGCGG TCGCCTCGGG GACGTCCCCG CGCGGACGGG GACAGGACGT CTCGGATCGA GGAGACCGGC AATGA
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Protein sequence | MEQGQEQETA EEREERFERD VLPFLDQLYS AALRMTRNPA DAEDLVQETF AKAFGSFHQF RQGTNLKAWL YRILTNTFIN SYRKKQREPK QAGTEDVEDW QLAQAASHTA AGLKSAEAEA LEHLPDTDVK RALQELPEDF RIAVYLADVE GFAYKEVAEI MGTPIGTVMS RLHRGRRQLR SMLEEYAVER GFLPARAAAE AGAVASGTSP RGRGQDVSDR GDRQ
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