Gene Ndas_3581 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3581 
Symbol 
ID9247450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp4294181 
End bp4295005 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content78% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003681488 
Protein GI297562514 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACCG ACACCGTCTT CCAGGAGCAG CGCCCGGCAC GGGCGCGCCG TTCCCACCCC 
GACCGCCTGT CGTGCCGTCC GCGGCGCGAC CACCGCACCG ACCCGCCGCC CCCCGCGGCG
GTCGAAGCGG ACGAGCCCGC TCGCGAGGAC GGGCCCGCCT CCGCGAAGGG CACCGCTCTC
CCGCGGGGGC ACGCCCGTCC GGAGGAACCC GGCCTTCCAG AGGAACCGGT CCGTCCGGAA
GGACCCGTCC TCGCGGAGGG ACCGGTCCGG TCGGAGGAGC CCCCGCACGC GGAGGAGCGC
GCGCATGAGC GGGACGGCGA GCTCGACCGG CTGGCGCTCG CCGCCCGTGA GGGCTCGGCC
GCCGCGCTCG ACGCGTTCGT CCGGCGCACC CGTCCCGACG TCGCCCGCTA CATCGCCCGC
AGGGTCCACC CCGACCGCGT CGAGGAGCTG AGCCAGGAGA CCTACCTGCG GGCCCTGCGC
GGCCTGCCGC GGTTCGCCGG ACGCGCCCCG GCGCGGACCT GGCTGCTGGC CATCGCCCGC
AACACCGTCG CCGACCGCTA CCGCCACGAC GCGGCCCGCC CCGACTGCGT GCACCACGCC
GACTGGGACC TGCTGCCCGC CCGGGCCGTC CGGTTCGACG AGCACGTGGC CCTGCTGTGC
CTGCTGGACG GCCTCGCGGC CGAACGGCGG CAGGCGTTCG TCCTCACCCA GGTGGAGGGC
CTGTCCTACG CCGAGGCCGC CCGGCTGGCG GACGTGCCCG TGGGCACGAT CCGCTCGCGG
GTGGCCCGGG CCCGCGGCGA CCTGGTGCGC GGGCTCACCG CCTGA
 
Protein sequence
MPTDTVFQEQ RPARARRSHP DRLSCRPRRD HRTDPPPPAA VEADEPARED GPASAKGTAL 
PRGHARPEEP GLPEEPVRPE GPVLAEGPVR SEEPPHAEER AHERDGELDR LALAAREGSA
AALDAFVRRT RPDVARYIAR RVHPDRVEEL SQETYLRALR GLPRFAGRAP ARTWLLAIAR
NTVADRYRHD AARPDCVHHA DWDLLPARAV RFDEHVALLC LLDGLAAERR QAFVLTQVEG
LSYAEAARLA DVPVGTIRSR VARARGDLVR GLTA