Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_3385 |
Symbol | |
ID | 9247250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 4047236 |
End bp | 4049386 |
Gene Length | 2151 bp |
Protein Length | 716 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | penicillin-binding protein 2 |
Protein accession | YP_003681296 |
Protein GI | 297562322 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.157729 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCCCG TCGACGACGT CGAACTGCCC GGCCGCAGAC TCGGCCGGGC CGGTTTGCTG CTCGCCCAGA TCCTGGTCCT GGTGCTCTTC GCGGCCCTGG CCGTACGGCT GTGGTACCTC CAGATTCCGA TGTGGGACCA CTACCGCGAG CTCGCGGTGG CCAACCACCA CCAGCAGCTC CTCGTCCCCG CCACGCGGGG GCAGATCCTG GACACCACCG GCCGCCCGCT GGTCAACAAC AGCACCGAGC TGGTGGTCTC CGCCGACTAC CACGAGATCA CGGGCATGGA GGACGGCGGC GAGAAGGTCC TGACCGACCT GTCCGAGGTG CTCGACGTCC CGCTGGAGGA ACTCCAGAAG CGCATGCGCC TGTGCGGGCC CGAGGTGAGC CGCCCGTGCT GGCCCGGCTC GCCCTACCAG CCCGTCACCC TCGCCGACGA CGTGGAGCCC TCCGTCGCCC TCCAGATCAT GGAGAGCGCC GACCGCTTCC CCGGGATCAG CGCCCAGGCC CACGCCGTGC GCGAGTACCC GCAGGGCGAG CACGGCTCCC AGATGCTGGG CTACCTGCAA CCGGTGACCC AGGAGGAGCT GGAGGCCCGC GAGGATCTGC GCACCCAGTT CACCGGCATC GACATGGTGG GCCGCGACGG CGTGGAGGCG GTCTACGACG CCCAGCTGCG CGGCACCGCG GGCAAGCGCG TCCTGGGCGT GAACAACCAC GGCGAGGTCA TGGAGGTCAT CTCCGAGGCG CCGCCCGAAC CGGGGATGCA CCTGGTCACC CACGTCGACC TCGGCGTGCA GAAGATCGCC GAGGAGGCGC TGGCCGAGGG GATGGCGAAC GCCCGGCCCC GCTACAAGGC CGACTCCGGC GCCGCCATCG TCCTGGACGT GCGCACCGGC GGCGTGGTGG CCATGGCGAG CCTGCCCACC TACGACCCCG CGATCTGGCG CGGCGGCATC GACCAGGAGA CCTTCGACGA GATGCTCAGC GAGGAGGCGG GCGAGCCGCT GCTCTCCCGA GCCGTGCAGG GCACCTACCC GCCGGGCTCC ACGTTCAAGG TCTCCTCGCT CGCGGCGGCC GCGGAGAACG GGTACTCGCT GCGCAGCACC TACGCCTGCC CGGGCTCGGT GAACCTGGCC GGGCAGAACT ACGAGAACTA CGAGGGCCAG GGCCAGGGTC CGATCAGCCT CCACGAGGCC ATCGTGGTCT CCTGCAACAC CGTCTTCTAC AACTTCGGCT ACCAGATGTG GAAGGACGAC GGCGGGCTCT ACCCCGACGG CGAGGCGGAC GAGGCGATGG CCGAGATGGC CAAGGGCTTC GGCTTCGGCT CCCCGACCGG GATCGACCTG CCCTACGAGA CCTCCGGGCG CATCCCCGAC CGCGAGTGGA AGCGCACCTT CTGGCAGGAG ACCCGCGAGA ACAACTGCCA CCGGGGCGAG CACGGCTACC CCGACGTCGC CGAGACCGAC CCGTCGCGCG CCGCCTACCT CAAGCTGCTG GCCTACGAGC AGTGCGTGGA GGGCTTCCAG TGGCGGGCCA ACGAGGCCGT CAACTTCGCC ATCGGCCAGG GGGACGTCCT CGTCACCCCG CTCCAGCTCG CCAGCGCCTA CGCGGCCGTC GCCAACGGCG GCACGCTCCA CGAGCCGCGC ATCGGCAGGG CGCTGGTCTC CGCCGACGGG ACGGAGGTGC GCGAGATCGA ACCGGTCGTG CGCGGCGAGC TCCCGGTCAG CGACGGGACG CTGGAGTACC TCCAGACCGC GCTCACGGCG GTCCCCAAGG AGGGCACCGC CCGCGGCGCC TTCGCCGGGT TCCCGCAGGA CAAGGTGTCC GTCGCGGGCA AGACCGGTAG CGCCGACGTG GAGGGGCGCC AGGTCTCCTC CTGGTTCGCC TCCTACGCGC CCGCCGACGA CCCGCAGTTC GCCATCGTCG TCCTGGTCTC CCAGGGCGGT ACCGGCGGTA CGACCGCGGC GCCCATCGCG CGCGCCATCT ACGACGGCAT CTACGGGTTC GACTCCCCGG CACAGGGAGC CGAGGCCGAG GTCGAAGAGG ATGCGTCCGG CGGCGCGGAG CCGCTGATCC CGGGCGGCGC GCCGCCCGAG CAACTGCCCG ACATCCGTCC CGACGGTTCC ATCGACCTGC TGGATCGGTA G
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Protein sequence | MSPVDDVELP GRRLGRAGLL LAQILVLVLF AALAVRLWYL QIPMWDHYRE LAVANHHQQL LVPATRGQIL DTTGRPLVNN STELVVSADY HEITGMEDGG EKVLTDLSEV LDVPLEELQK RMRLCGPEVS RPCWPGSPYQ PVTLADDVEP SVALQIMESA DRFPGISAQA HAVREYPQGE HGSQMLGYLQ PVTQEELEAR EDLRTQFTGI DMVGRDGVEA VYDAQLRGTA GKRVLGVNNH GEVMEVISEA PPEPGMHLVT HVDLGVQKIA EEALAEGMAN ARPRYKADSG AAIVLDVRTG GVVAMASLPT YDPAIWRGGI DQETFDEMLS EEAGEPLLSR AVQGTYPPGS TFKVSSLAAA AENGYSLRST YACPGSVNLA GQNYENYEGQ GQGPISLHEA IVVSCNTVFY NFGYQMWKDD GGLYPDGEAD EAMAEMAKGF GFGSPTGIDL PYETSGRIPD REWKRTFWQE TRENNCHRGE HGYPDVAETD PSRAAYLKLL AYEQCVEGFQ WRANEAVNFA IGQGDVLVTP LQLASAYAAV ANGGTLHEPR IGRALVSADG TEVREIEPVV RGELPVSDGT LEYLQTALTA VPKEGTARGA FAGFPQDKVS VAGKTGSADV EGRQVSSWFA SYAPADDPQF AIVVLVSQGG TGGTTAAPIA RAIYDGIYGF DSPAQGAEAE VEEDASGGAE PLIPGGAPPE QLPDIRPDGS IDLLDR
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