Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_3254 |
Symbol | |
ID | 9247111 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 3890215 |
End bp | 3890889 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | Haloacid dehalogenase domain protein hydrolase |
Protein accession | YP_003681166 |
Protein GI | 297562192 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGAGA CGACTTTCGA CCGACACGAC AGCACCCACA TCGTCTGGGA CTGGAACGGC ACCCTCCTCA ACGACAACCA CGCCAACCTC GCCGCGGTGA ACGCCGTGTG CGAGCTGTTC GGCCGCGACC CCGTGGAGCT GGACCACTGG CGCTCCGTCT TCCGCCGCCC CCTCATCCCC TGCTACGAGG AGCTCCTCGG CCGGGCCTTC GAGGAGGGCG AGTGGGAGCG GGCGGAGCGG CACTACGACA GCAGCTACCA GGAGCTGCTG CCCTCCTGCG AACTCACCGC GGGCGTCCCC GACGTCCTCC GGGAGTGGAC CCGCGGCGGC GGCACCCAGT CCCTGCTGTC CATGGCCTCC CACGACCACC TGGTGCCCCT CATCGAGGAG CGCGGCCTGA CCGGGCACTT CACCCGGGTG GACGGCCGCC AGTTCCAGAC CGAGGACGAC TCCAAGGCCG AGCACCTGGT GCGCCACCTC GAACACCAGG GCATCGACCC GGCCCGGGTC GTGCTGATCG GCGACATCGA CGACGACGCC CGCGCCGCCC GCGAGGCCGG GGCCCGCTCC ATCCTCGTCA CCAGCGGCCT GATGTCCCGC GCCCGCCTGG AGGCCACCGG CTCCCCGGTG GTCGACTCCC CGGCGGCCGC GGTGGCCGCG CTGCGCGGCG CCTGA
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Protein sequence | MAETTFDRHD STHIVWDWNG TLLNDNHANL AAVNAVCELF GRDPVELDHW RSVFRRPLIP CYEELLGRAF EEGEWERAER HYDSSYQELL PSCELTAGVP DVLREWTRGG GTQSLLSMAS HDHLVPLIEE RGLTGHFTRV DGRQFQTEDD SKAEHLVRHL EHQGIDPARV VLIGDIDDDA RAAREAGARS ILVTSGLMSR ARLEATGSPV VDSPAAAVAA LRGA
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