Gene Ndas_3254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3254 
Symbol 
ID9247111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp3890215 
End bp3890889 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content73% 
IMG OID 
ProductHaloacid dehalogenase domain protein hydrolase 
Protein accessionYP_003681166 
Protein GI297562192 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAGA CGACTTTCGA CCGACACGAC AGCACCCACA TCGTCTGGGA CTGGAACGGC 
ACCCTCCTCA ACGACAACCA CGCCAACCTC GCCGCGGTGA ACGCCGTGTG CGAGCTGTTC
GGCCGCGACC CCGTGGAGCT GGACCACTGG CGCTCCGTCT TCCGCCGCCC CCTCATCCCC
TGCTACGAGG AGCTCCTCGG CCGGGCCTTC GAGGAGGGCG AGTGGGAGCG GGCGGAGCGG
CACTACGACA GCAGCTACCA GGAGCTGCTG CCCTCCTGCG AACTCACCGC GGGCGTCCCC
GACGTCCTCC GGGAGTGGAC CCGCGGCGGC GGCACCCAGT CCCTGCTGTC CATGGCCTCC
CACGACCACC TGGTGCCCCT CATCGAGGAG CGCGGCCTGA CCGGGCACTT CACCCGGGTG
GACGGCCGCC AGTTCCAGAC CGAGGACGAC TCCAAGGCCG AGCACCTGGT GCGCCACCTC
GAACACCAGG GCATCGACCC GGCCCGGGTC GTGCTGATCG GCGACATCGA CGACGACGCC
CGCGCCGCCC GCGAGGCCGG GGCCCGCTCC ATCCTCGTCA CCAGCGGCCT GATGTCCCGC
GCCCGCCTGG AGGCCACCGG CTCCCCGGTG GTCGACTCCC CGGCGGCCGC GGTGGCCGCG
CTGCGCGGCG CCTGA
 
Protein sequence
MAETTFDRHD STHIVWDWNG TLLNDNHANL AAVNAVCELF GRDPVELDHW RSVFRRPLIP 
CYEELLGRAF EEGEWERAER HYDSSYQELL PSCELTAGVP DVLREWTRGG GTQSLLSMAS
HDHLVPLIEE RGLTGHFTRV DGRQFQTEDD SKAEHLVRHL EHQGIDPARV VLIGDIDDDA
RAAREAGARS ILVTSGLMSR ARLEATGSPV VDSPAAAVAA LRGA