Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_3184 |
Symbol | |
ID | 9247041 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 3808847 |
End bp | 3810862 |
Gene Length | 2016 bp |
Protein Length | 671 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003681098 |
Protein GI | 297562124 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0347906 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCGGG GCACGAGCAC CAGGGAACCG GAGAACGAGG AGGGAACGGC ACCGCCCGGA GCCGCCGACG GACCGGGAGC ACGCCAGTCG ACCGACGCCG CCGAGCACAC CGGGGTCTTC GCCCGCGGCA TGCGGGTGCT GTGGGTCGCC GCCCGCACCG AACCGTGGGT CTTCCTCGCC GCCGTCGTCG GGGCCATGCT GCACGCCGCC GTCAACGTCG GCTCCGCCTC GGTCCTGGGC CACCTCACCG ACGCCACCAT CCTCCCCGCC TTCGAACAGG GCAGCACCAC CGCCGCCGCC CTCGTCGGCG CCGCCGCGCT CCTCATGGGC GTGGGACTGG GCAAGGCCAC CGGCATCGCC ATGCGCCGCA TGCTCGCCGC GCTCATGCAG TTCCGCATGC AGGCCCGCTA CCGCCGCGCC GTCGCCCGCA AGTACCTCGA ACTGCCCCTG TCCTGGCACC ACCGCCACCC CACCGGACAG CTGCTGTCCA ACGCCAACGC CGACGTCGAG GCCGCCTGGC AGCCGCTCGC CCCGCTGCCC ATGGCCGTCG GCAGCGTGTT CATGCTGGTC ATCGCGGCCA TCGCCATGCT CACCACCGAC CCGGTCCTGG CCCTGGTCGC CTTCGTCGTC TTCCCGGTCC TGGCCGCCGC CAACGTCGTC TTCCAACGGC GCGTCTCACC CATGGCCTCG CGCGCCCAGG CGCTGCGCGC CGAGGTCAGC GGCGTCGCCC ACGAGTCCTT CGACGGCGCA CTCGTCGTCA AGACCCTGGG CCGCGAGGAC ACCGAGACCG AGCGCTTCAC CTCCGCCGCC CACCGCCTGC GCGACGCGCT CATCCAGGTC GGCCGGATGC GCTCGATGTT CGACCCGGTC ATGGAGGCCC TGCCCAACTT CGGCGTGCTC GCCGTCCTGC TCCTGGGCAT GTGGCGGCTG TCCACCGGCG CCATCGACGC CGGGGACCTG GTCCAGATCG CCTTCCTGTT CACCCTCCTG GCCCTGCCCA TCCGCTCCTT CGGGTGGATC CTGGGCGACC TGCCCCGCAG CGTCGTGGGC TGGGACCGCG TCCAGTCCGT ACTCAACTCC GGCGGCGCCA TGGAGTACGG CACCCGCACC CTGGAGGACA CTCCCACCGG CATCGCCCTG AGCGCCCGCG GCGTGACCTT CTCCTACGCC GACTCCTACG ACGCGCGGGG CGGCGCGCGC GACCTCATGG ACGGCGGAGC CGACACCGCG CCGCGCACCA CCGTCCTCAA CGGCGTGGAC CTGGACATCG CCCCCGGACG CACCGTCGCA CTGGTCGGCC CCACCGGGTC GGGCAAGTCC ACGCTCACCA CCGTCCTCAT GCGCCTGGTC GACGCCGACA CGGGCACCGT CACCCTCGAC GGCGTCGACG TGCGCGACCT GGCCCGCGAC CAGATCCCCC GGCACGCTGC CCTGGTGCCC CAGGGCACCT TCGTGTTCGA GGACAGCGTC CGCGACAACA TCACCCTGGG CGCCGACGCC GACGACGACC AGGTCTGGGC CGCCCTGCGC CTGGCCCGCG CCGACGGCTT CGTCCGAGAA CTGGAGGGCG GACTCGACGC CCGGCTCGGC GAGAAGGGCA CCACCCTCTC CGGAGGGCAG CGCCAGCGCC TGGCCCTGGC CCGCGCGATC GTGCGCCGCC CGAGGCTGCT CATCATGGAC GACGCCACCT CGGCCGTGGA CCCCCAGATC GAGGCGCAGA TCCTGGCGGG CCTGCGCGAA CGCGACGACG CCGCCACCGT GGTCGTGGTC GCCTACCGCC GCGCCACCAT CGAACTCGCC GACGAGGTCG TCTACATGGA ACGCGGACGC GTGCTGGCCC GCGGCACCCA CGAGGAACTG CTCACCACCT CGCCCGGCTA CACCAGGCTC GTCACCGCCT ACGAGCGCGC CTCCGCCGAG GGGCAGGCCG AGACAGACCC GCTGCCCGAG GAACCAGGCC CCCTCGAACC CGCCCGCCCC ACCCGTGACG ACGCCGCCGA GGAGGCCACC CGATGA
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Protein sequence | MARGTSTREP ENEEGTAPPG AADGPGARQS TDAAEHTGVF ARGMRVLWVA ARTEPWVFLA AVVGAMLHAA VNVGSASVLG HLTDATILPA FEQGSTTAAA LVGAAALLMG VGLGKATGIA MRRMLAALMQ FRMQARYRRA VARKYLELPL SWHHRHPTGQ LLSNANADVE AAWQPLAPLP MAVGSVFMLV IAAIAMLTTD PVLALVAFVV FPVLAAANVV FQRRVSPMAS RAQALRAEVS GVAHESFDGA LVVKTLGRED TETERFTSAA HRLRDALIQV GRMRSMFDPV MEALPNFGVL AVLLLGMWRL STGAIDAGDL VQIAFLFTLL ALPIRSFGWI LGDLPRSVVG WDRVQSVLNS GGAMEYGTRT LEDTPTGIAL SARGVTFSYA DSYDARGGAR DLMDGGADTA PRTTVLNGVD LDIAPGRTVA LVGPTGSGKS TLTTVLMRLV DADTGTVTLD GVDVRDLARD QIPRHAALVP QGTFVFEDSV RDNITLGADA DDDQVWAALR LARADGFVRE LEGGLDARLG EKGTTLSGGQ RQRLALARAI VRRPRLLIMD DATSAVDPQI EAQILAGLRE RDDAATVVVV AYRRATIELA DEVVYMERGR VLARGTHEEL LTTSPGYTRL VTAYERASAE GQAETDPLPE EPGPLEPARP TRDDAAEEAT R
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