Gene Ndas_3010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3010 
Symbol 
ID9246863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp3593463 
End bp3594467 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content66% 
IMG OID 
Productglyceraldehyde-3-phosphate dehydrogenase, type I 
Protein accessionYP_003680926 
Protein GI297561952 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0625099 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCATCC GTGTAGGCGT CAACGGCTTC GGCAGGATCG GCCGCAATTT CTGGCGCGCG 
GTCGCCGCTG GTGGTAGCGA CATCGAAATC GTCGCGGTCA ACGACCTCAC CGACACCAAG
ACGCTCGCGC ACCTGCTCAA GTACGACACC GTGCTCGGCA CCCTGGAGGG CGACGTCGAG
GTCGGCGACG ACTTCATCCG CGTGGGCGAC AAGACCATCA AGGTCCTGGC CCAGCGCGAC
CCGGCCCAGC TGCCCTGGTC GGACCTGAAC GTGGACGTGG TGGTCGAGTC CACCGGCATC
TTCACCAAGG CCGAGGACGC CAAGAAGCAC ATCGAGGCCG GCGCCAAGAA GGTCATCATC
TCCGCCCCGG CCAAGGGCGA GGACATCACC GTCGTCATGG GCGTCAACGA CGACAAGTAC
GACGCGGCCA ACCACCACGT CATCTCCAAC GCCTCCTGCA CCACCAACTG CGTCGCGCCG
ATGGCCAAGG TCCTCCTGGA CAACTTCGGC GTCAAGCAGG GCCTGATGAC CACGGTCCAC
GCCTACACCA ACGACCAGGT CATCCTGGAC TTCCCGCACA AGGACCTGCG TCGCGCCCGC
GCGGCCGCGC AGAACATCAT CCCGACCACC ACCGGTGCCG CCAAGGCCAC CGCGCTGGTC
ATCCCCGAGC TCCAGGGCAA GCTGGACGGC ATGGCCATGC GCGTCCCCGT GCCCGACGGC
TCCGTGACCG ACCTGGTCGT CACCCTGGAG CGCGAAGTCA CCAAGGACGA GGTCAACGCC
GCGTTCAAGG CCGCCGCCGA GGGTCCGCTC AAGGACGTGC TCGTCTACAC CGAGGACGAG
ATCGTCTCCT CCGACATCGT CGGCACCTCG CCCTCGTGCA CCTTCGACTC CAAGCTGACC
ATGGCCTTCG GCAACCAGGT CAAGATCGTC GGCTGGTACG ACAACGAGTG GGGCTACTCC
AACCGCCTGG TCGACCTGGC CAAGCTGGTC GGCTCCGGCC TGTAG
 
Protein sequence
MTIRVGVNGF GRIGRNFWRA VAAGGSDIEI VAVNDLTDTK TLAHLLKYDT VLGTLEGDVE 
VGDDFIRVGD KTIKVLAQRD PAQLPWSDLN VDVVVESTGI FTKAEDAKKH IEAGAKKVII
SAPAKGEDIT VVMGVNDDKY DAANHHVISN ASCTTNCVAP MAKVLLDNFG VKQGLMTTVH
AYTNDQVILD FPHKDLRRAR AAAQNIIPTT TGAAKATALV IPELQGKLDG MAMRVPVPDG
SVTDLVVTLE REVTKDEVNA AFKAAAEGPL KDVLVYTEDE IVSSDIVGTS PSCTFDSKLT
MAFGNQVKIV GWYDNEWGYS NRLVDLAKLV GSGL