| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_2986 |
|---|
| Symbol | |
|---|
| ID | 9246839 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 3567469 |
|---|
| End bp | 3569094 |
|---|
| Gene Length | 1626 bp |
|---|
| Protein Length | 541 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 80% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF324 |
|---|
| Protein accession | YP_003680902 |
|---|
| Protein GI | 297561928 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0321062 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.494788 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGGCG AGCCAGCCCC GCCCGGGCTG CTGTGGGAGG TCACCCTGCG GCTGTGCCTG
CTCTCCGACA CCCACGTCGG GGCGGCCCGG GCCAGGCCCC GCCACGCCGC CGGAAGCGAC
GCGGACCTGC ACGTGGACCG CGACCCGGTC ACCGGCGCGC CCCGTCTGCG CGCCACCACC
CTGGCCGGGC TGCTGCGCCA CGAACTCGCC GCCCGCACGG GCGACCCCGA CGACGTCCGC
GCCCTCATGG GCTCGGCGGA GTCCGAGGCC GCGCCGGGCG GGGAGGGGGC CGCCGCGAGC
GCGCTGGACG TGGACGACGC CCGCGCCGAA CTCCCCGAGG ACACAGCGGT AGCGGTCCGC
ACCGGCATCC GGGTCGACCC GGCCGCGGGC ACCGTCCAGC CGGGCCGCAC GTGGCGGTGG
GAGATCCTGC CCGCGGGTAC CGTGTTCACC GCCCACCTGC GCCTGCACGT GCCCGCACCG
GCCGACGAGG CCCGCCTGCT CACCCTGCTG CTCCTGGCCT GCGACGGACT CTCCGGGCCC
GGCGGGTCCG GCCCCGGCAT ACGCGTGGGC GGGCGCACCG GCCGCGGCTA CGGCGCCGTC
CGCGCCACCC ACTGGTCGGC GCGCCGCCAC GACCTCACCG ACGAGCGCGG CTGGCTCGCC
TACCACGCGC GCTCCTGGGC CCGGCGCTGG GAGGAGGGCG CCGACGCGCT CGCCGACGCC
CCCGCCGACC TGGCCGCCGC CCTGACCGGG GCCCTGCGCG CCTGCGGGCG CGGGGCCACC
GCCGCCCACG CGCTCGCCCG CGCGCACCGG CCCGACCGCC GCCACCGCGC CGAACTCCAC
CTGACCCTGG CCGTCGCCGA GCAGCCCGAT CCCACCGCCC CGCCGCCGCG CGACCCCAGG
CCCGGCCTGC TCATGGTCGG CGACGCCCCC GCCCCCGAAC GCCTGGGCGA GGCGGACCGG
GCACACCGCC ACCGCCCCGC CGTCACCGAC CCGGACAAGG CCGCCGTCCA CCCCGCCCCG
GTCCTGGGCG ACACCGCGCT GTTCGCCCTG TTCAAGAGGA TCGGCGGCCG ACTGGTCCGG
GACGCGGCCG AACACCTGGG CGCCGGGCCG GACCGGTGGC GCGACTGGCA CGACCACTGG
TGGGGCGCCG ACACCGACCG GCGCGGCCTC CCGCGCCCCG CCCGGATCCG GCTGCGCACC
GTCCCCGTGC TCACCGGCGG AGCACCCCTG ACCGCCACCC GGCTGACCGT GGACTCCCTC
TTCGGCGACG CCGTGGACGG CCGCCTGTTC ACCACCGACC TGCACTGCGG CGGCAGCGCC
GAGGCGGTCC TGGACGTGCG CGAGCCCGAC GACGCCGTCC GCGGTCTGCT CGCCCTCCTC
GTGCGGGAGC TGGCCACGGT ACCCTTCGAC ACCCTCGGCG CGGGCGCCGG AACCGGGAAC
GGGCGCCTGA CCGCCACCCG CGCCCTCCTG ACCACCCACC CCCCGGGCGG AGGGCCACCG
GACACGGTGG ACCTGCTCAC CGCCCTGTTC GCACCCGACA GCGCCGACGC GGCCACCGCC
CGCGGCTGGC TGGCCGCCCT GCACGCCGCG CTCGCCCCCG CGCCCACCAC GGAGGAGCCC
AGGTGA
|
|---|
| Protein sequence | MSGEPAPPGL LWEVTLRLCL LSDTHVGAAR ARPRHAAGSD ADLHVDRDPV TGAPRLRATT
LAGLLRHELA ARTGDPDDVR ALMGSAESEA APGGEGAAAS ALDVDDARAE LPEDTAVAVR
TGIRVDPAAG TVQPGRTWRW EILPAGTVFT AHLRLHVPAP ADEARLLTLL LLACDGLSGP
GGSGPGIRVG GRTGRGYGAV RATHWSARRH DLTDERGWLA YHARSWARRW EEGADALADA
PADLAAALTG ALRACGRGAT AAHALARAHR PDRRHRAELH LTLAVAEQPD PTAPPPRDPR
PGLLMVGDAP APERLGEADR AHRHRPAVTD PDKAAVHPAP VLGDTALFAL FKRIGGRLVR
DAAEHLGAGP DRWRDWHDHW WGADTDRRGL PRPARIRLRT VPVLTGGAPL TATRLTVDSL
FGDAVDGRLF TTDLHCGGSA EAVLDVREPD DAVRGLLALL VRELATVPFD TLGAGAGTGN
GRLTATRALL TTHPPGGGPP DTVDLLTALF APDSADAATA RGWLAALHAA LAPAPTTEEP
R
|
|---|
| |