Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_2873 |
Symbol | |
ID | 9246724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 3431861 |
End bp | 3433147 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | |
Product | RNA methyltransferase, TrmA family |
Protein accession | YP_003680790 |
Protein GI | 297561816 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.608612 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGTG TGGGACAGGA TTTCGAGCTG ACCGTGGACG ACGTCGCGCA CGGGGGCTGG TGCGTGGGGC GCCACGAGGA CCAGGTGGTC TTCGTCCGCC ACGCCCTGCC CGGCGAGCGG GTCCGCGTCC GCGTCACCGA GCAGACCTCC CGCTTCATGA GGGGCGACGC CGTCGAGGTC CTCCAGGCAT CCCCGGACCG CGTCCAGGCC CCCTGCCCGG CCGCCGGGCC CGGCAAGTGC GGAGGCTGCG ACTGGCAGCA CGCCGCCCCG GAGGCCCAGC GGGCCCTCAA GGGCAAGGTC GTCGCCGACC AGCTGCGGCG CATCGCCGGG ATCGACCGCC GGGTCGAGGT GGAGGAGCTG CCCGGCACCC CCGACGGCCT GGGCTGGCGC ACCCGCGTGC GCTTCGCCGT GGACTCCGGC GGCCGCGCCG GACTGCGCCG CCACCGCTCC CACGACATCG AGCCCGTCGA GCGCTGCCTC ATCGCCCACC CCGGCGTGAC CGAGCTCGGG GTGACCGACG TCACGTGGGA GGGCGTCCGC GACGTGGAGG CGGTCGCCTC GGCCGCCTGC GCCGACCGCG CGGTGGTCGT CACACCGACC GGGGCCAGGC TGGACTCCCT GCCCGAACTG GGTACCTCCA GCGCGGTGCT GCGCCGGTTC AAGGGCGGCC GCGTCCAGCA GGTGCGCGGA CGCAGGGGCG TGCGCGAGAA GGTCGACGGC CGCGAGTACC GCGTCAGCGC GGGCGGCTTC TGGCAGGTGC ACCCGGCCGC CGCCGAGGTG CTCACCGCCG CCGTCCTGGA CGCCCTGGAG CCCAAGCCCG GCGAGACCGC CCTGGACCTG TACTGCGGGG CGGGGCTGTT CACCGGCGCG CTGGCCGCCG CCGTGGGCCC CGAGGGCCGC GCCATGGGCG TGGAGAGCGG CGCCGAGGCC GTGCGCGACG CCCGGTACAA CCTCAAGGAC ATGGAGCAGG TCCGCGTCGA GCAGGGCGAC GTGGCCGCCC AGCTGCGCGA GTGGGCTGAC GTGCGCGCCG ACGTGGTCGT GCTGGACCCG CCCCGGGCCG GTGCGGGCGC CGAGGTGGTG CGCTCCCTGA CCGGGACGCG CCCCCGCAGG GTGGCCTACG TCTCGTGCGA CCCCGCCACG CTCGCCCGCG ACCTGGCCTC GTTCGAGCGG GCCGACTACC GTCTGGTGGA CCTTCGCGCG TTCGACGCCT TCCCGATGAC CCATCACGTG GAGTGCCTGG CGGTGCTGGA GCCGGTCCAC CCGGCCCGCC GCCACCGGGA GGGCTGA
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Protein sequence | MNRVGQDFEL TVDDVAHGGW CVGRHEDQVV FVRHALPGER VRVRVTEQTS RFMRGDAVEV LQASPDRVQA PCPAAGPGKC GGCDWQHAAP EAQRALKGKV VADQLRRIAG IDRRVEVEEL PGTPDGLGWR TRVRFAVDSG GRAGLRRHRS HDIEPVERCL IAHPGVTELG VTDVTWEGVR DVEAVASAAC ADRAVVVTPT GARLDSLPEL GTSSAVLRRF KGGRVQQVRG RRGVREKVDG REYRVSAGGF WQVHPAAAEV LTAAVLDALE PKPGETALDL YCGAGLFTGA LAAAVGPEGR AMGVESGAEA VRDARYNLKD MEQVRVEQGD VAAQLREWAD VRADVVVLDP PRAGAGAEVV RSLTGTRPRR VAYVSCDPAT LARDLASFER ADYRLVDLRA FDAFPMTHHV ECLAVLEPVH PARRHREG
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