Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_2717 |
Symbol | |
ID | 9246568 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 3237971 |
End bp | 3239944 |
Gene Length | 1974 bp |
Protein Length | 657 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | peptidase C14 caspase catalytic subunit p20 |
Protein accession | YP_003680637 |
Protein GI | 297561663 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.814877 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGGAGC AGGCCGCGTC GAAGCCGCCC GACGGGGGGC GGATGGACAC CGCGGGCGGT GGGCGGGGCC GGTTGGACCC CGCCCGGTCG GCCTGTGTCC TGATCGGGGT CGACGCCTAC CAGAACCTGC CGGATCTGCG CTCGGTGCCG CGGAACCTGA AGGATCTGGA ACGGGCGCTG GCGGACACCG ACCTCTGGGG CGTTCCCGAG GACCGGCGCT GGGTGGTGCG CAACCCCTCC CTGCCGGGCG AGCTGACCGG GCCGATCTAC GACGCCGCGG ACAAGGCCGA GGACACCCTG CTCGTCTACT ACGCCGGGCA CGGCCTCCTG GAGATCCGCG ACGACCAGCT CTACCTGACG CTCTCCAGCT CGGTGCGCGA CCGCAGCGAG ACCTCGCTCG CCTACGGTGT GCTGCGCGAC ATCCTCAGGG AGTCCAGGAA GAGCGTCAAG CGGCAGATCG TGATCCTCGA CTGCTGTTAC AGCGGCAGGG CGCTCGACGG AGTGATGACC GGGACGACGG TCCCGGACAA GCAGCAGATC GAGATCGAGG GCTCCTACGT CCTGACCTCC ACCACCGGGA GCGGTCAGGC CAAGGCCCCT CCGGAGGCGA GGCACACCGC CTTCACCGGT GAGCTCATCG ATATCCTGAC CAGCGGCGAC CCCGGGAACA AGCAGCAGGA ACTGCTCACC CTCAACCAGA TCTACCGCCT GCTGAGGACG AGGCTCGCCG ACAAGGGCCT CCCGGAACCG CAGCGGATGG ACCGGAACGG CGTCGGCGAC CTGCTCTTCG TACGCAACCG GCAGGGTCCG CGTCCTCCCG TGCCGGTCCC CGCGGCGCTG CCGCGCCGCA CGATGGCCTC CCTGGCCGCC GCGACCCTGG TCCCCGGCCT CCTCCTCGGA GGGCTGGGCG GCTACCAGCT CCGCGAGTGG ACGGACCCGC GCTTCGGCAC CGCACCGTTT CCCGGCCCCT GCGACACGCA CGGCCGGGCG CGGCTCCTCG ACGTCTCCGA CCAGCTCGAC CAGCCGCCCG AGAACGAACA CCTGGGGAGC CCGGTCGAGG GCCTGTCCGC CCTCGCCCTC ACCGGCAACG GCTCCGAGGC CCTCGTGATC CGCGACAACG AGCCCGCGCA GTTCTTCACC CTCGGGCTCG GCGCCCCCGA GTCCCTGGCC CCCACCGTCA CGGGAATGCA GATCCTCTAC GGTCCGGACG GTGAGTCCTT CGACGCGTTC GACGGCGAGG GGCTGGTCGT GGAGAACGGC GGTGAGAGCA TCCTGGTCGC GGCCGAGCAC GAACCGTCCA TCCGCCGTTT CGGGACCGCC GACGGCGGGC AGATCGGGGA CCCCCTACCG CTGCCGGAGG CCTTCCTCCC GGCCCCGCTC GGCGAGGCGC AGCCCGGACG CAACCTCGAA TCCCTGACCG CCACCCCGGA CGGCGCCCAC CTGTTCGCGG GTATGGAGGG CCCGCTCTTC GGCGACGCGG ACGTGCACGG CCGCCACCAG CTGCGTATCC AGCGCTACCG GGGCGAGCCC GGAGGCGCCT ACGCACTCGA CCGCCAGTAC GGGTACCAGA CGGAGGTGGG CCTCTACCTC GCGGAGCTGG CGGCGATCGA CGAGAACCAC CTGCTCGCCC TCGAACGCGG TTACCTCGGC GGGCTCGGCA ACGCCATCCG CGTGTACGAG GTGAACCTCG GCGCCGCCCA GGATGTGACC GGCAGGACGC TCAGCAGGAA CGCCGGTGAC CTCCTGGCCC ACAAGGAACT CCTGTTCGAC ATGGCGGACT GCCCTGAGGG CGACGTCGTC TCCGACGAGA CCCAGCAGAA CCAGATCCTG GCCAACGTCG AGGGCATGGC CCTCGGTCCC GTGATGAGGG AGGCCCCCTA CGAGGGCCGC CGCGTGCTGT ACCTGGTCTC CGACGACAAC GGGCGCCACA CCCAGGCGAC CCGGCTCTAC TCGCTCGCGG TCGACCTGGG CTGA
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Protein sequence | MTEQAASKPP DGGRMDTAGG GRGRLDPARS ACVLIGVDAY QNLPDLRSVP RNLKDLERAL ADTDLWGVPE DRRWVVRNPS LPGELTGPIY DAADKAEDTL LVYYAGHGLL EIRDDQLYLT LSSSVRDRSE TSLAYGVLRD ILRESRKSVK RQIVILDCCY SGRALDGVMT GTTVPDKQQI EIEGSYVLTS TTGSGQAKAP PEARHTAFTG ELIDILTSGD PGNKQQELLT LNQIYRLLRT RLADKGLPEP QRMDRNGVGD LLFVRNRQGP RPPVPVPAAL PRRTMASLAA ATLVPGLLLG GLGGYQLREW TDPRFGTAPF PGPCDTHGRA RLLDVSDQLD QPPENEHLGS PVEGLSALAL TGNGSEALVI RDNEPAQFFT LGLGAPESLA PTVTGMQILY GPDGESFDAF DGEGLVVENG GESILVAAEH EPSIRRFGTA DGGQIGDPLP LPEAFLPAPL GEAQPGRNLE SLTATPDGAH LFAGMEGPLF GDADVHGRHQ LRIQRYRGEP GGAYALDRQY GYQTEVGLYL AELAAIDENH LLALERGYLG GLGNAIRVYE VNLGAAQDVT GRTLSRNAGD LLAHKELLFD MADCPEGDVV SDETQQNQIL ANVEGMALGP VMREAPYEGR RVLYLVSDDN GRHTQATRLY SLAVDLG
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