Gene Ndas_2611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2611 
Symbol 
ID9246462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp3110507 
End bp3111142 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content74% 
IMG OID 
Productpeptidase M15B and M15C DD-carboxypeptidase VanY/endolysin 
Protein accessionYP_003680534 
Protein GI297561560 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.348942 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.132011 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCAG TGACGAAACG GGAGACGCTG GAGGGCCTCC CCGCCGGGAA CCCGGCCGGG 
AGCCCCGGCG GCGGTCCGCC CGGCCGCGGA TGGCGGCCCC GGTACCGGCT GGCCGCTGCC
CTGTGCGCCG CGGTGGCCGT CGTGCTGGCG GCCTGGTCGG TGAACGTGCT GGTGCCGGAC
CGGGAGGAGG CGGTCTTCAC CGCTGAGGAC GGCGCCCTTC CGGACGACCT GTCGGTCACC
CCGTTCGACA CGCAGTACCC CTCGATCGCC CGCCTGGACG GTGCGCTGCT GGAGGCCGTG
CGGGAGGCGG CCCGGGACGC CCTGGAGGAA GGGATCGTCC TCCACGTCAC GTCGGGCTGG
CGCAGCGGGG AGTACCAGCG GCACCTGCTC GACCAGGCCG TCCTCGACCA CGGCTCCCGC
GAGGAGGCCG GGAGGCTGGT CAGCACCCCG GAGGAGTCCA GGCACGTGAC CGGGGAGGCG
ATCGACATCG GCCCGACCGA CGCCGCCGAC TGGCTCGTCC GCCGCGGTTC GGCCTACGGG
CTGTGCCAGG TCTACGCCAA TGAGATGTGG CACTTCGAAC TGCTCACCGA GCCCGGCGGC
GACTGCCCCG ACCTGCTGTC CGACGCCGCG GGTTAG
 
Protein sequence
MSAVTKRETL EGLPAGNPAG SPGGGPPGRG WRPRYRLAAA LCAAVAVVLA AWSVNVLVPD 
REEAVFTAED GALPDDLSVT PFDTQYPSIA RLDGALLEAV REAARDALEE GIVLHVTSGW
RSGEYQRHLL DQAVLDHGSR EEAGRLVSTP EESRHVTGEA IDIGPTDAAD WLVRRGSAYG
LCQVYANEMW HFELLTEPGG DCPDLLSDAA G