| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_2552 |
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| Symbol | |
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| ID | 9246403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014210 |
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| Strand | + |
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| Start bp | 3043317 |
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| End bp | 3045797 |
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| Gene Length | 2481 bp |
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| Protein Length | 826 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | |
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| Product | penicillin-binding protein transpeptidase |
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| Protein accession | YP_003680477 |
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| Protein GI | 297561503 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.389315 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.368811 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACGAAC GGTCCCCCCG GCAGCCGGAT TCCTCCGGGC CGCCCGAAGC ATCGCACGAG
CCCTCGGCGC ACCCCCCGCG CCCCGCCAAC CCCTACCGCA TCCCCCAGCG CACCCAGGGG
CCTCCGCCCG AGGAACCCGC GGCCCCGTCC GCGCCGGTTC CTCCCCCGCA GCCCGACCTC
CCGCAGCGGT CCGCCGGGTC CTGGGACTCC CCCGCCTCGT GGGACGAGCC CCCACACGGA
GGAACCACCG ACGACGGATG GGGCGCCCCG TCCGCGCACG CCTGGGAGCC CTCCCGGCAC
GAGGGCTCCG GCGCCCACGG CAACGCGGGG CGCCCGCAGG GGCCCTCCTC GTGGGACGAG
CCCCCGCGCG GCCCCGACCG GGGCGGCGCC CAGGACTGGA ACACCCCCTA CCCCTCCGCG
CAGGGCCCCT CCGGCGACTG GGACGGCTCC CGGCCCCGAG GCGACGAGGA GCACGACGCC
TGGCAGGACG GGGCGCACGA CTCCTGGCAG GAGGCCCCGG CCTCCCGGCA CGGCGCGCGC
GAGCCCGCAG CCGGACACGG TCACCCGCAC GGTCGCACCG ACACCTGGGA CGACGACCCC
TACCCGGGTC AGCCCGTCCA CCACGGCGAC ACCCCCTACC CGGGCGACGC GCCCCCTCCT
GCGCCGGACC ACGGCGGCCG CGGGGAGACC GGCCCCCAGC ACGGCCATGG TTCCCCGGAC
GGCTTCGAGT ACCTCTACAG CGGCGGCGGC CCGGGCTCGG GCGGGCCGGA CGACCCCGAC
CGCCACGGGG ACGACGGCTA CGACCCCGGT CCCCCGCCGC GCAAGTCGCG GCGCGGACTG
CTCATCGGCG TGCTCTCCGC CGTCGTGGTG CTGCTGCTCG TCGGCGGCGG CGCGTCCTGG
TACGTCCTGA CGATGCCCGA ACCCGAGGAG GCCGCCGCCG AGTACGAGGC CGCCTGGGAG
GCGCAGGACT ACGAGCGCCT GGCCGCGGTC ACCCGGGGCG GCGACGCCGC CGCGGTGCTC
GGCGGCATCG ACTCCGGACT GGGCGTGGAC TCCATCGCGG TGGAGGTCGG CACGGTGACC
GCCGACGGCG GCACCGGCAG CGCGCCCTAC GAGGTCACCG TGTCGCTGAC CAACGCCGAC
GACTGGGGCT GGGAGGGCGA GCTGCCGCTG GTCCGCGAGG ACGGCGAGTG GTGGGTGGAG
TTCTCCCCCG AGGTCGCCTA CCCCGGCCTG GGAGAGGGCC AGGTCCTGGC CCGCACCGCC
GTGTGGGGCG AGCGCGGCAG CGTCCTGGCC GCCGACGGCA CCGCCCTGGA CGGCACCGTC
TCCGGTTCGC TCCAGATGAT CGCGGGCTCC CTGGGCGAGG CCACCGCGGA GGACGTCGAG
CGGCTGGGCC CGGCCTACAG CGTCGGCGAC ACCGTGGGCG TCAGCGGCCT CCAGCGCACC
TACGAGGAGC GGCTGGCCGG TGAGGCCGCC ACGACCATCC TCATGGTCGA CGCGGCCGCC
GCCGAGGACC CCGACTCCCT AGAGGCCACC GAGGAGAACA CGGTGGCCAC CCTGGACGGC
GCCGACGGCG AGGACGTGGT CACCAGCATC GACATGGCCG TCCAGAACGC GGCCTCCAAC
GCCGTCATCG ACTCGGCCGA CCCGGCGGGT CTGGTGGCGG TGCGCCCCTC CACCGGCGAG
ATCCTGGCCG CGGCGAACGT GCCCGGCGGT TTCAACCGGG CCTTCGAGGG CCAGTACCCG
CCCGGGTCGT CGTTCAAGAT CATCACCTAC AGCTCGCTGC TGGACAACGG GATGGGCATG
GACGCCGCGA TGAGCTGCCC CAAGGAGTAC GACCTGGGCG GGTGGCCGTT CGTCAACGCG
GGCGACGCCG AGTACGGCGC CCAGACGGTG ACCGAGGCGT TCGCGACCTC CTGCAACACC
GCGCTGGTGG AGCAGGTCGG CGACCGGCTC AGTTCGGACA CGCTCCAGGC CAGCGCCGAG
CAGTTCGGCA TGAACGCGCC GCTGGACATC GGCGTGCCCA CCCTCGAACC GTCCTTCCCG
CCGGTGGACA GCGCCACCAT GCTGGGTGCC CAGAGCATCG GCCAGGGCCA GATCCTCACC
TCGCCGCTGC ACATGTCCAC GGTGCCCGCC GCGGTCGCCG ACGGTTCCTG GCGCCACCCG
GTCCTGGTGA CCGAGCCCGC TCCGGAGGGC CTGCCCGAGC CCCGCGCGAT CGCCCAGGCC
GAGGCGCTGC GGACGATGAT GCGCGCGGTC GTCACCGAGG GCACCGCCGA GGACGTGCCC
TTCCAGGGCG AGGTGTACGC CAAGTCGGGT ACGGCCGAGT TCGGCACCGC CGAGGACGCC
GACGAGGACG GGGAGCTGCC CAGCCACGCC TGGATGGTCG GCTTCAAGGG CGACGTGGCC
TTCGCCGTGG TGGTCGAGGG CGGTGGCGGC GGCTCGTCCG TGGCCGGTCC CCTGGCCGCC
AGCTTCACCA ACGGCCTCTG A
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| Protein sequence | MDERSPRQPD SSGPPEASHE PSAHPPRPAN PYRIPQRTQG PPPEEPAAPS APVPPPQPDL
PQRSAGSWDS PASWDEPPHG GTTDDGWGAP SAHAWEPSRH EGSGAHGNAG RPQGPSSWDE
PPRGPDRGGA QDWNTPYPSA QGPSGDWDGS RPRGDEEHDA WQDGAHDSWQ EAPASRHGAR
EPAAGHGHPH GRTDTWDDDP YPGQPVHHGD TPYPGDAPPP APDHGGRGET GPQHGHGSPD
GFEYLYSGGG PGSGGPDDPD RHGDDGYDPG PPPRKSRRGL LIGVLSAVVV LLLVGGGASW
YVLTMPEPEE AAAEYEAAWE AQDYERLAAV TRGGDAAAVL GGIDSGLGVD SIAVEVGTVT
ADGGTGSAPY EVTVSLTNAD DWGWEGELPL VREDGEWWVE FSPEVAYPGL GEGQVLARTA
VWGERGSVLA ADGTALDGTV SGSLQMIAGS LGEATAEDVE RLGPAYSVGD TVGVSGLQRT
YEERLAGEAA TTILMVDAAA AEDPDSLEAT EENTVATLDG ADGEDVVTSI DMAVQNAASN
AVIDSADPAG LVAVRPSTGE ILAAANVPGG FNRAFEGQYP PGSSFKIITY SSLLDNGMGM
DAAMSCPKEY DLGGWPFVNA GDAEYGAQTV TEAFATSCNT ALVEQVGDRL SSDTLQASAE
QFGMNAPLDI GVPTLEPSFP PVDSATMLGA QSIGQGQILT SPLHMSTVPA AVADGSWRHP
VLVTEPAPEG LPEPRAIAQA EALRTMMRAV VTEGTAEDVP FQGEVYAKSG TAEFGTAEDA
DEDGELPSHA WMVGFKGDVA FAVVVEGGGG GSSVAGPLAA SFTNGL
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