Gene Ndas_2526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2526 
Symbol 
ID9246377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp3001448 
End bp3007306 
Gene Length5859 bp 
Protein Length1952 aa 
Translation table11 
GC content73% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003680451 
Protein GI297561477 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.258664 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00801542 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAGTTCT CCGCGAGGCC GCGCGACTAC CGGATCAAGG ACCACAGCCC GCTGATCGAC 
GACGCGACCT TCAAGGAGAG CGTCAAGGAC GGCACCAGCC TCACCCAGAG CCGCAACACG
AGCTTCACCC TGACGGGGGG GACCGGTTTC GGCCTGGTGG CCGAGCTCCC CTCCGGAGGA
ACCCTGCGTG TCAACGCCCC CCATGTGGAG GCCACCTGGT GGCAGTCGCT GCACTCCGAG
AGCCACAACG CCTCCGGCTC GGGCGAGCAC CGGTCCCTCA GCCGCTACGT CTCCTCCACG
GAGAGGTTCG CCGCCTACGA GGCTTCCCAC GACCTGTTCG TCCACGTCCA GGGCGAGGCG
GCGCCCCACC ACTTCACCGT CACCGGTGTG GAGCTGCTCC CCGGCGAGAC CGCGGGCCGG
CTGGACCGGG CGGCACGGGG CGAGGGGCCC GCCGACAGCG GGGGCGAGGG CGAGCGGCGC
CCGCCCTTCC CGCACCTGGA CACCGAAAAC CCCGTCCACT TCCGGGGGTC CCACTTCCTC
GGCCTGGAGT GGAGCTCTCC CGCCCCCGGC GACGGGAGCG ACGGGGACTC CGACGGCTCC
CGGGGGACCG GGGCCCCGGA CACCTCCGGG GCATCGGCAC CGCCGGTCAC GTCGGACGAC
CGGCGCGGCG TCCTGGACCG GTACCTGGAC GACGTGCTGG CCGGGATCGC ACGCGAGCAC
CCTGGCCTGG TCATCCCCGA ACTGGCCCGC GACCGGAACA CCTACGCCCG CAGGCCCGGA
CGGGAGGAGG CCTCCTACTT CGAGCGTTCG TTCCGTGAGC GCTGGGGGTT CCGCCGCTCC
TACGACACCG CCTACAAGAA CACGATGCTG GTGCGCGACA CCCTCCAGAG CACCCTGGGC
AAGGACGGCC TCGAAAGGCT CGCCCGCCCC GGGGAGGGCC TGCCCGTCCG GCTCCGGGAG
TCGGCGACGG TGGACCCGAC CCTGATGGCG AGGCTGAAGG AGTTCCTCCG CCCGAACACG
GTCACCGTCC GGCTGCACGC GGAGTTCGGC CGGCTGTCCC ACGACGGGAA GAGCACCGCC
GAGACGGGCC TTCGGGTGCG CGGCACCGCC TCGGCCTCCA CCGAGTCCGC GACCGGGAGC
GCGTTCACCC TCGCCGTCTC CGCGGGTTCG GGCATGGTGC GCTCGGCCGA GGGCGACGCC
CGCGGGTTCG CCCGGCTGCT CGGCGGGTTC ATGGCCTCGA TGGGCTGGAA CCGGGTCGAC
CACTTCGACG CGGCGTACGG CCTGGAGCAC AAGTCCGACG CCCGCCTGTT CTTCCCCGAG
GGCTCGGACC GGTGGAGCGG CGAGGTGGTG CTCAGCGCCC GCCTGCACGA CCACGACGCC
GATGAGCAGG CCCGCGGCAC CAGCCGGGGG ACGGACCTGC TGGACAGGCC CATCAAGGCC
GCCTACTCCG TGGTCACGCC CACCACCGTC GGCGACAACC TGGTCTCCGC GCGGCCGGAA
CCGGGGCAGG CCGACCGGGA GCGGTCGGAA CTGACCCCCG AAGAGGCCCG GGAGATGCTC
GACCCCCGTC CGGGGCGCCG CGACTCCCCC GGGGAGGACG CCCCGGGCGC CGAGGACGGG
GCCGCGCCGT CCGAGGGGAC CGCCCGGACC TCCGGGGCGG AGGGGGAGGC CCCCGCCGAC
CCGCCGACCG ACAACACGCG TGTCCTGCTG GACCACGGCG CGATCATCGA GCACGTCAAC
CCCCTGCTCC GGGAGGCGGG CGACACGGGA CCGGGCCGCA ACCTCCTGCG CCGCACCCTC
GACGTGTTCT CCCGTCCGCG CCGGTTCTGG TCGGACGGGG GGCGGATGAA GCTCTCCTCC
TTCCTGGACG GCGTCGGCGG ATCGGCCCTC CTCGCCAACC TCGTGTCCCC CACCGCGGTG
GCCTCCGATC CCGCCTCCTT CGCGGAGTCG GGCCGCCGCA GGCGGATCGA GATGCGGGGC
ACCTGGCTGT CCCCCAACGA CATGCGGGCC ACCGGGGTCA CCAAGGTCAC GGTCGGCGAG
ATCACCGACC TGAGGCTGAC CAAGGCACAG GTCACCGTCC AGGCCGAGAC GTCGTCGACG
GCGTCCGCCG CCGTCACCAG GATCAGCGGC TTCTTCGCCC GCTTCACGGG CTTCGCCGGT
GGGACCACCA ACTCCATCGA GGAGGGCGGG GCCGAATCCG GCGCCGACCG GTCCACCGCC
GACGGCATCA TCCCCATGGC CGGTCCCTCC CACATCAGGA GCTTCCTCCG CCGCGGCGAG
ACGACGGACT CCGGGGTCTC CTCCGCCTCG GGGCTCCTCC TGCTGCCCAA GGCGGCGGCC
GTCTACGCCT TCACCGCCGC GGGCGCGATC GCGCAGGCGT GGGAGTTCAA GAAGCACCGC
GGCCTCAACC TCCCCAACTG GTGGACCCAC AGGTACGCCG GGTGGAGGGC CCGGGTCGAC
GACCTCGTCT CGGGCTACAT CACCGCCCGC GACGCCGAAC AGGCCGGCGT CATCACCGAC
GCCGTGACCC ACGGGGACGA CGGCGCGCCC GAACCCTCGA CCCAGGCCAA CCCCGCACCA
CCGCCCCACG CCCGCGTCCG CGCCGGATTC GACAGCGCGG GCAGGCAGGC CCTCCCCGTC
GACCCGGCCC GCGCCGTGGA CGCGCTGGAG ACGAGGCTTC GCGCCCACGG GCTCACCCTC
AGCCGCGGGG GCAAGGAGCG CCTGCTCGTG ACCCTCTCCG AGCAGCTGGG GACCGCGACG
GACGCGCTCC CGCCCGTTCC CGTCAACGTG GTGTCGACGG ACCGCAACGC CCACTTCTCC
AAGCCCGCGC GGGTCCTGGT GAAGTTGGAC AGGACCAACC CCCGGGTGGA CTACGTCACC
TCGGCCGCCG CCACCGTCGA GGCCCACTCC TGGCAGGCCG AGCACTCGCA CGAGGACTCC
CGGCAGGCCT CGCACACCAC GGGCCTGGAC TTCGTCCCCT GGCAGCCCAG CGGCACGAAC
GGCGGCAGCG ACCGGCCGCC GGACAGCAGC CTCCTCTTCG TCTCGCCCGC CGCTGGGGCC
GGTGGAACCC GGAACGCGTC CGAGGGGTTG TCCTCGTCCG CGGAGACCAC CCACACCATC
GTGATGGAGT CCTCCGGCCC CTACGTGAAG ATGACGGAGG ACGCGTCCCT GACCCTGACC
ATCGAGGTCG ACGGCGACGG GCTCGTGCCC ACCGCGGGGG TCAGGCGGGG GGAGAGGGCG
CCGTACCTGG AGTACAAGTC GCCGGTCGTG GAGACGGCGA CGGTGGACGG AGGACGGATA
CGCACCTTCC ACCTGGGTTC GTCGCTGGAC TTCACCCCGC CCGCGGCGCC CGCCGCACCG
CTGGACACGG TGCCCGCGCC TCCCACCGCC ACCCCCCGCG CGGGCGACAC CCTCGCGGGC
GCCCTCACCA CCGCCACCGG GGAGCTCGCC CCGCCTCCGG ACGCACTGCG CGACGCCGTC
ATCATGCCCA CCGCCGTCCA CGGACCCGAC CTGCGCGACA CCGCGCTGCG GACCGTCGCC
GCGTCGCTCG GCTGGGAGCC CCCGGCCGCC CCCGACTTCG GAGGCGACCC GACCGCCGAG
CAGCTCGACC AGCTCCGCGC CCACCACGCC CGCGCCACCG ACGACGCCCG CCGCCACATC
GCCGACCGCC TCGAACTCGA CCCCCGCTAC ACCCCCATCG ACAACTCCCT CAACCCCGTG
GCCCTCAAGG GCCTCCTCTC GCACAACCTC GGCCGCCCCT CCGGTACCGA CATCCTGCGG
ATCGGGCGCA CCCAGTGGCG TGTCGCCGCC ACCCCCGACT TCACCGGCGC CCGTATCGTC
ACCGCGCGCC CCGACGCCAG GCTCGTCCAC AAGGAGGCCG AAGGGCGGAG CGTCTCCCAC
AGCCGCTCCC AGGGCGGCGG AACCACCGCC ACCACGGCCT TCCGGCCCAC CGGCCACCAC
ACCGTGGACC CCGACGACAA CGACCGCAAC GCCTACCTCA CCGGCTCCGG GGAGGCCACG
GCGCGCACCA TCACCGGTGA CTCGCCCACG GGCGACGGCC TGGCCAGCGG AGAGCCCTCC
GACATGGAGC GCCAGCGGCT CGGCACCGCC TACCTGGTGG AGTTCGACAC CACCTGGACC
ACCGGCGCCC GAACCGAGGA GAAGGCGTTC TTCGGTGGCA CCGTCCCCCG GCAGTTCACC
TCCCACCACA CCAACAGGAC CAGCGCCTGG ATCTCCCGGA GCGACGCCGT AGCCCTGGGC
GTCCTCACCT CCGAACAGGC AGACGCCGCC GAAGCGCCCA TCACCGCCGA GTACGACGCC
GCCAAGGCCA TGGCCGACGC CGAGGCCGCC TACACCGAGC AGCGCGCCAA ACTCCCCGCA
CTGGTCAAGG CCTACCTCGA CGCGTACAAG GCCCACGCCG CCGACCCCAC ACCCGCGAAC
CGCGCGGCCC TCGACGACGC CCGCACCGCC TACGGAACCC AGACCACCGC CTACCGGACA
GCCCTGGGCG CCTACAACGA CGCCGTGACT GCCTGGACCA CCGCGACCAA CGCCACCGCC
GCCCACCTCG CCGATATCAC CCCGCCCGAC GCCCCGCCGC CGGCGGCCCC CCGTTCCACA
CCCAGCGCGC CGCTGGAGGA GCAGCTCCGC CCGGTGTTCG GCCTCACGCC CCGGGAGGCT
CCGGCCGCGC CCGACCCGAG CGGCACGACG ACGGAACCGG ACTCGCGCAC CCCGGCCCCC
GCGGCCGGGC CGCCGCACCC GGGGACCACC TCCCGCACGA CCGTCTTCGC CATGACCGAC
ATCGCCGGAG AGGTGCGGGA TCCGGACGGG GACGGCACCG GGATGAGCGG CGCCGACCTC
GACTCCCTTG CCCGCGGACT GGGGCTGACG GACACCGACG ATCCCGCCGC GTCCGGGTCC
GGGACGATCC GCCGGCTACC GACCGGGGCC GAAACCGACC GCTACGGCGA CCTCCTGCAC
GACCCCGCCT ACAACCCCAA CACCTTCGAC GCCCTCCCCA CCGCGACCCA GGACGCGGTC
TCCGCCTACA CCTGGTCCGC CTGGCTGAAC GACTTCGCGC GGCTGCACCC GTTGAACGAG
GCGACGGTGC AGGCCGAACT GGACCGGATC CGCGACCAGA GCCGACCCCA CCCCGGATGG
CAGGTCTACG AGATCGGCGG CGGCCGCTGG CCCGACCTCA CGCAACTACG AGAAGCCGCG
CAGCGGGGCG GGCTGAGCCC CGAGCAGCAG CGGATCGAGC GGGGCGTCCT CGACAACCGG
TATCCGGAGG CGGCGCTGGA GAACCTCCGC GTACACTCCG GGACGCGCGG GCGAAATCGC
CGAATCCCTC GCCCTGGGCG GGGAACCGGC GCACTTCCCC GACGCCCCGG AAGTCCTGGA
TCTGTTCCGG CACCTGGACC GCGCCACCGG CCACCCCTTC CCCGAGGGCT TCGAAGCCGT
GCGCGGGACG TACGAGTACC AGCACCTGCT GGGCGAGGGC AACACCGATC CCTACAGCCT
CGCGGGGACC ACGCACGTGA GTGCGGGGTA TTTCTCGGCG TCCCTCGGTA CCGTTCCGTC
CGCAGCGGGC GGCTCCTCCA TCAACCTGAT GCGGCTGACC GTGCCGCACG GCTCCCACGG
GCTGTGGGTC GGCGACCGCA GCCAACACCC CCGCGAACGC GAGGTGATCC TCGCCTGGGG
GACCCGCTAC CAAATCACCG CGGTCGAACC CTGGGGACGC GGCTACCTCT TCCACGCCCA
GATCCTGCCC CCCGCGCACG AGGACGGGCC CACCATCACG GCCCCGACCT GGACGGGCCA
GGCACTGGAG CGCATCGACC AGACCCTGAA CGTGAATGA
 
Protein sequence
MEFSARPRDY RIKDHSPLID DATFKESVKD GTSLTQSRNT SFTLTGGTGF GLVAELPSGG 
TLRVNAPHVE ATWWQSLHSE SHNASGSGEH RSLSRYVSST ERFAAYEASH DLFVHVQGEA
APHHFTVTGV ELLPGETAGR LDRAARGEGP ADSGGEGERR PPFPHLDTEN PVHFRGSHFL
GLEWSSPAPG DGSDGDSDGS RGTGAPDTSG ASAPPVTSDD RRGVLDRYLD DVLAGIAREH
PGLVIPELAR DRNTYARRPG REEASYFERS FRERWGFRRS YDTAYKNTML VRDTLQSTLG
KDGLERLARP GEGLPVRLRE SATVDPTLMA RLKEFLRPNT VTVRLHAEFG RLSHDGKSTA
ETGLRVRGTA SASTESATGS AFTLAVSAGS GMVRSAEGDA RGFARLLGGF MASMGWNRVD
HFDAAYGLEH KSDARLFFPE GSDRWSGEVV LSARLHDHDA DEQARGTSRG TDLLDRPIKA
AYSVVTPTTV GDNLVSARPE PGQADRERSE LTPEEAREML DPRPGRRDSP GEDAPGAEDG
AAPSEGTART SGAEGEAPAD PPTDNTRVLL DHGAIIEHVN PLLREAGDTG PGRNLLRRTL
DVFSRPRRFW SDGGRMKLSS FLDGVGGSAL LANLVSPTAV ASDPASFAES GRRRRIEMRG
TWLSPNDMRA TGVTKVTVGE ITDLRLTKAQ VTVQAETSST ASAAVTRISG FFARFTGFAG
GTTNSIEEGG AESGADRSTA DGIIPMAGPS HIRSFLRRGE TTDSGVSSAS GLLLLPKAAA
VYAFTAAGAI AQAWEFKKHR GLNLPNWWTH RYAGWRARVD DLVSGYITAR DAEQAGVITD
AVTHGDDGAP EPSTQANPAP PPHARVRAGF DSAGRQALPV DPARAVDALE TRLRAHGLTL
SRGGKERLLV TLSEQLGTAT DALPPVPVNV VSTDRNAHFS KPARVLVKLD RTNPRVDYVT
SAAATVEAHS WQAEHSHEDS RQASHTTGLD FVPWQPSGTN GGSDRPPDSS LLFVSPAAGA
GGTRNASEGL SSSAETTHTI VMESSGPYVK MTEDASLTLT IEVDGDGLVP TAGVRRGERA
PYLEYKSPVV ETATVDGGRI RTFHLGSSLD FTPPAAPAAP LDTVPAPPTA TPRAGDTLAG
ALTTATGELA PPPDALRDAV IMPTAVHGPD LRDTALRTVA ASLGWEPPAA PDFGGDPTAE
QLDQLRAHHA RATDDARRHI ADRLELDPRY TPIDNSLNPV ALKGLLSHNL GRPSGTDILR
IGRTQWRVAA TPDFTGARIV TARPDARLVH KEAEGRSVSH SRSQGGGTTA TTAFRPTGHH
TVDPDDNDRN AYLTGSGEAT ARTITGDSPT GDGLASGEPS DMERQRLGTA YLVEFDTTWT
TGARTEEKAF FGGTVPRQFT SHHTNRTSAW ISRSDAVALG VLTSEQADAA EAPITAEYDA
AKAMADAEAA YTEQRAKLPA LVKAYLDAYK AHAADPTPAN RAALDDARTA YGTQTTAYRT
ALGAYNDAVT AWTTATNATA AHLADITPPD APPPAAPRST PSAPLEEQLR PVFGLTPREA
PAAPDPSGTT TEPDSRTPAP AAGPPHPGTT SRTTVFAMTD IAGEVRDPDG DGTGMSGADL
DSLARGLGLT DTDDPAASGS GTIRRLPTGA ETDRYGDLLH DPAYNPNTFD ALPTATQDAV
SAYTWSAWLN DFARLHPLNE ATVQAELDRI RDQSRPHPGW QVYEIGGGRW PDLTQLREAA
QRGGLSPEQQ RIERGVLDNR YPEAALENLR VHSGTRGRNR RIPRPGRGTG ALPRRPGSPG
SVPAPGPRHR PPLPRGLRSR ARDVRVPAPA GRGQHRSLQP RGDHARECGV FLGVPRYRSV
RSGRLLHQPD AADRAARLPR AVGRRPQPTP PRTRGDPRLG DPLPNHRGRT LGTRLPLPRP
DPAPRARGRA HHHGPDLDGP GTGAHRPDPE RE