Gene Ndas_2438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2438 
Symbol 
ID9246288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2891721 
End bp2892812 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content76% 
IMG OID 
Producttransport system permease protein 
Protein accessionYP_003680364 
Protein GI297561390 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0761977 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.566289 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCCCCC ATGTGGCCGG GAGGCCCGTG ACGGCCGTGC CCTCGGGAGT CCGGCGCCGG 
CTGCGGGCCG CGGCCGACGG TTCCGGGGTT CTCGTCAGTG CCCGCGCCCG CGTCGCCGGG
TTGGCGGTGG CGCTGCTGGT CCTGGCCGCG ACCCTGCTGG CGTCGGTCCT GGTCGGTTAC
GAGCGGCTGT CCGTGGCCGA CGTGTACCTC GCCTACGCCG GTTTCACCGG TTCGGACACC
GACTTGGTCG TGCGGCACCT GCGTGTGCCG CGTACCCTGG CCGGGCTGGC GGTCGGCGCG
GCCCTGGGCG TGTCCGGGGT CCTGGCGCAG GGGGTGACCC GCAACCCCCT CGGTGACCCC
GGCGTCCTCG GCATCAACGC GGGCGCCTCC CTGGCGGCGG TCCTCGCGAT CAGCGTGTTC
GGGGTGTCCG CGCTACTGGG CTACGTCGGC TTCGCCTTCG CGGGCGCGGC GGTCGCCGCC
TGCGTGGTCC ACGCCGTGGG GTCGCTGGGT CCGGAGGGGG CCAGTCCGGT CAGGCTCACG
CTCGCCGGAG CCGCGGTCTC GGCCCTGCTG GCTTCGCTGA CCTCGGCGAT CGTCCTGCGC
GACCGCGCGA GCCTGGACGA GTACCGGTTC TGGGTGGTGG GCTCGCTGGC GGGTGCCGAC
GGCGCGGCGC TGCTCCAGGC GCTGCCGTTC CTGGCCGCCG GGCTGGTGAC GGCGGTGGCG
GTGGCCCGGT CCCTGAACGC GGTGGCGCTC GGCGACGAGC TGGCCCGCTC CCTGGGGACA
CGGCTGTGGC TGGTGCGCGG GACGAGCGCC CTGGCGGTGG TGCTCCTGGC GGGGACGGCG
ACGGCCGTGG CGGGTCCGAT CGGCTTCGTC GGGGTCGCCG TGCCGCACGT GGCGCGGGTC
CTGGTCGGCC CCGACCACCG ATGGGTGCTG CCCTGGTCGG CGGTGCTGGC GCCCGTCCTG
TTGTTGGCGG CCGACGTCGC GGGCCGGGTG GTGGCGCGTC CCGAGGAGTT GCAGGTCGGC
GTCCTCACCG CTCTCATCGG TGCGCCGTTC TTCGTCCTCG TGGTGCGCGG GCGAAGGGTG
GCGGGGCCGT GA
 
Protein sequence
MAPHVAGRPV TAVPSGVRRR LRAAADGSGV LVSARARVAG LAVALLVLAA TLLASVLVGY 
ERLSVADVYL AYAGFTGSDT DLVVRHLRVP RTLAGLAVGA ALGVSGVLAQ GVTRNPLGDP
GVLGINAGAS LAAVLAISVF GVSALLGYVG FAFAGAAVAA CVVHAVGSLG PEGASPVRLT
LAGAAVSALL ASLTSAIVLR DRASLDEYRF WVVGSLAGAD GAALLQALPF LAAGLVTAVA
VARSLNAVAL GDELARSLGT RLWLVRGTSA LAVVLLAGTA TAVAGPIGFV GVAVPHVARV
LVGPDHRWVL PWSAVLAPVL LLAADVAGRV VARPEELQVG VLTALIGAPF FVLVVRGRRV
AGP