Gene Ndas_2316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2316 
Symbol 
ID9246166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2763077 
End bp2763898 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content75% 
IMG OID 
Producttranscriptional regulator, AraC family 
Protein accessionYP_003680244 
Protein GI297561270 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.870051 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCAGAC CAGACACCCG GCCGAGTCCC GCCGGGCCCC CGCGGCGCGA GGCGATCGAC 
AGCCGCAGGC TCCCCTCCTA CGCCGCCGGT GAGATCGAGG TGCCCTTCGT CGTCATGGGC
AGCGCCGAGA TCATCCCCCG GGACACGTTC TGGGAGGAGC ACTCGCACCC CACGCACGAA
CTGCTCTGGA ACCAGCGGGG CGCCTCCTCC GCCACCGTCG GCACGCGGGT CTGGACGATC
ACCCCCACGG TCGGCCTGTG GCTCCCGGCC GGGACGCGCC ACTCCGGGTG GACCCCCGCG
GGGACCTGGC ACCGCGCCGC GCAGTTCGGC GTCCACGCGG TGCCCTCGAT CTCCGACGGG
CCCGTGGCCA TGGAGATCAC CCCGCTCCTG CGGCTCCTGC TCGACCGGCT CGACGCCGAG
GGCCTCACCG CGGACGAGCG TTCACGGACC GAGGCGATGG TGCTGGACAT CCTCGCCCCG
GCCCGCCTCG AGCTGATCCT GCACATCCCC GAGTCACCGC TGCTGGCCCC CATCGTCGCC
GCCGTGCGCG AGGACCCCGC CGACACCACC ACCCTGGCCG TGTGGGCGGC GCGGCTGGGC
GTGAGCACCC GCACCGTCAC CCGGGCGTTC CGCGCCGAGA CGGGCCTGGG GTTCAGCCAG
TGGCTGACCA CCGCGCGCGT GCAGCACGCG GTGACGATGC TCGCGCGGGG GGACGAGATC
GACGAGGTGG CGGTGTGCGT GGGCTACCAC TCGGCGAGCG CGTTCGGCGC GGCCTTCCGG
CGGGTCACGG GGCTGAGTCC GGGCCGCTTC CGCGCCCTGT GA
 
Protein sequence
MVRPDTRPSP AGPPRREAID SRRLPSYAAG EIEVPFVVMG SAEIIPRDTF WEEHSHPTHE 
LLWNQRGASS ATVGTRVWTI TPTVGLWLPA GTRHSGWTPA GTWHRAAQFG VHAVPSISDG
PVAMEITPLL RLLLDRLDAE GLTADERSRT EAMVLDILAP ARLELILHIP ESPLLAPIVA
AVREDPADTT TLAVWAARLG VSTRTVTRAF RAETGLGFSQ WLTTARVQHA VTMLARGDEI
DEVAVCVGYH SASAFGAAFR RVTGLSPGRF RAL