Gene Ndas_2185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2185 
Symbol 
ID9246035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2611347 
End bp2612588 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content77% 
IMG OID 
Productintegrase family protein 
Protein accessionYP_003680113 
Protein GI297561139 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0291516 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000847111 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGTGA ACACACCCCA GCCCACCCCC GACCCCGCGC CCGCCCACGA GATCGCCCTG 
CCCGGGGCCG TGCGCGCCCG CCTGGAACAG GCCACCCCCA GCGTCCTGGT CGACACCCGC
GCCCTGGCCC GCGTCCGCGA GCGCTTCGAC ACCGAACAGG CCCAGACCCT GGGCCGCTAC
CTGGCCAGCG CCCAGTCGCC CAACACCCTG CGCGCCTACC GCGCCGACTG GACCTCCTTC
ACCGCCTGGT GCCTGGCCCA GGAACGCCAG TCCCTGCCCG CCGACCCGGT GGACGTGGCC
GTGTACCTGG CCGCCTGCGC CCAGGAGCGC ACCCCCGACG ACACCGGCTG GGCCCTGGCC
CCCTCCAGCA TCGAACGGCG CGCCGCCGCC ATCGCCGCCG TGCACGGCGC CCACGGCCTG
GACTCGCCCA CCCGCGCCGA GGTCGTGCGC ATGACCCTGC GCGGCATCCG CCGCACCCGC
CGGGCCCGCC CGCGCCGCAA GGAACCGGTC ATCCTGCCCG TCCTGGAGGC GCTGCTGTCG
GTGCGCCCGG GCCCCGAACA CCCCCACGGG GTGGCCCGCA GACGCGACAC CCTGCTGCTG
CTGACCGGGT TCGGCGGGGC CCTGCGCCGC AGCGAACTGG CCGCGCTGAC CTTCGACGAC
CTGACCCTGC ACACCGACCC CGCCACCGGT GCCCCCGCCC TGGTGGTGGC ACTGGGCGCG
ACCAAGACCG ACCAGGAGGG CCGCCACGGC CAACGGGTCG CCCTGCCCCG GGGGCGGCAC
CGCCACACCT GCCCGGTGTG CGCCTACGCC GACTGGGCCG CCCTGGTCGA GACCCACCGC
GCGGGCGGTG AGGAGGCGGT GGCCGCCCTG CTGGAGCGCC CCCGCCCCGA GGGGGCCCTG
GCCCATCTGT GCCAGGGCTG GCCGGGCACG GACCTGGCCG ACGGCTCCGA GCGCCCCCTG
CTGCCCGCCG TGGACCGCCA CGGCCACCTC GGGTCGCGCC CGATGTCGGG CCGGGCCGTG
GGGGAGCTGG TCAAACGCTA CGCCCGCCGC GCCGGGCTGG ACCCCGACGA CTTCGGCGGG
CACTCCCTGA GGGCGGGGTT CGCCACCCAG GCCGCGCTGG GCGGGGCCAG CGACCGCGAG
ATCATGCGCC AGGGCCGCTG GACCAACCCG CGCACGGTCC ACGACTACAT CCGCACCGCC
AACCCGCTGG AGGACAACGC CGTCACCCGG CTGGGCCTGT GA
 
Protein sequence
MTVNTPQPTP DPAPAHEIAL PGAVRARLEQ ATPSVLVDTR ALARVRERFD TEQAQTLGRY 
LASAQSPNTL RAYRADWTSF TAWCLAQERQ SLPADPVDVA VYLAACAQER TPDDTGWALA
PSSIERRAAA IAAVHGAHGL DSPTRAEVVR MTLRGIRRTR RARPRRKEPV ILPVLEALLS
VRPGPEHPHG VARRRDTLLL LTGFGGALRR SELAALTFDD LTLHTDPATG APALVVALGA
TKTDQEGRHG QRVALPRGRH RHTCPVCAYA DWAALVETHR AGGEEAVAAL LERPRPEGAL
AHLCQGWPGT DLADGSERPL LPAVDRHGHL GSRPMSGRAV GELVKRYARR AGLDPDDFGG
HSLRAGFATQ AALGGASDRE IMRQGRWTNP RTVHDYIRTA NPLEDNAVTR LGL