Gene Ndas_2158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2158 
Symbol 
ID9246008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2579894 
End bp2580304 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content73% 
IMG OID 
ProductProtein of unknown function DUF2000 
Protein accessionYP_003680086 
Protein GI297561112 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.11004 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGATGT CCACCAAGAT CGTCGTCGTC CTGCGCGAGG GCCTGGAGCC CGCGCTCGCC 
GCCAACGCGG GGGTGGTGCT CGGCCTGGCG CTGGGCGGAC GGATGGAGAA CTCGCTGGCC
GCCGACGGCA AGGACGCGGG CGGCGGCCTG CACGCCGGGC TCAACCCGCA CCCGGTGCCG
ACCCTGGTGG CCTCGGCGGA GCAGTTGCGC GCGCTCAAGG CCGGGGCCGA CGAGCGCGAC
CTGACGGTGG TGGGCTTCAA CGAGGTGGCC CGCCGCTCCC GCGACTACGT GGAGTACCTG
GACGCCCTCG CGGTCACCGA GCCGCAGGAC GTGGAGTACG TGGGGGTGGC CGTCTTCGGG
GCGCGCAACG CCGTCAACAA GCTCACCGGG AAGCTGGCGC TGATGCGCTG A
 
Protein sequence
MGMSTKIVVV LREGLEPALA ANAGVVLGLA LGGRMENSLA ADGKDAGGGL HAGLNPHPVP 
TLVASAEQLR ALKAGADERD LTVVGFNEVA RRSRDYVEYL DALAVTEPQD VEYVGVAVFG
ARNAVNKLTG KLALMR