Gene Ndas_1956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1956 
Symbol 
ID9245806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand+ 
Start bp2380174 
End bp2380941 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content71% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003679889 
Protein GI297560915 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0268336 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones2 
Fosmid unclonability p-value0.00000346818 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGGTCC GCGTGCTGAG AAAGGTGGTC GCGACGCGGT ACGTGCTGCC GCTGCGCGAA 
GGAGGTTCGC TCCCGGGGTT GGTCGAGGCC GACGACCTGG GGATGTACGT GGTCAAGTTC 
CTCGGGGCGG GGCAGGGGCG CAAGACGCTC GTGGCCGAGG TCGTCGCGGG GGAGCTGGGC 
CGCGCCCTGG GGCTGCCCGT TCCGGAGCTG GTCACGGCGG AGTTCGACGC GGTGATCGGC 
CGCAGCGAGC CCGATCCCGA GGTGCAGGAG CTGCTCAAGG CCAGCGGCGG GCTCAACCTG 
GGGATGGACT TCCTCCCCGG TTCGCTGGGC TTCGATCCGC TGACCTTCGA GGTGGACCGG 
GGGTTCGCCG GGCGGGTGCT GTGGTTCGAC GCGCTGACCG GCAACGTGGA CCGGTCCTGG 
CGCAACCCGA ACATGCTGCT GTGGCACGGG CGCCCCTACC TGATCGACCA CGGTGCGACG 
CTGATCTTCC ACCACAACTG GGCCAACGCC GACCGGTTCG TGCACCGCCC CTACGACGCC 
TCCGACCACG TGCTGTCGGG TGCGTCGCCG GACCTGGCCG CCGCGGACGC GGACCTGGCG 
CCCTTGGTGG ACGAGGGTCT GCTGCGCCGT GTGGTGGAGT TGGTGCCGGA CGAGTGGCTG 
GTGGACGAGC CCGGGTTCGA CGGTCCCGGG GATGTGCGTG CGGCGTATGT GCGGTACCTG 
CTGGCCCGGG TGGCCGAGCG TTCCTGGCTG CCGGAGGTGA CGGGATGA
 
Protein sequence
MLVRVLRKVV ATRYVLPLRE GGSLPGLVEA DDLGMYVVKF LGAGQGRKTL VAEVVAGELG 
RALGLPVPEL VTAEFDAVIG RSEPDPEVQE LLKASGGLNL GMDFLPGSLG FDPLTFEVDR 
GFAGRVLWFD ALTGNVDRSW RNPNMLLWHG RPYLIDHGAT LIFHHNWANA DRFVHRPYDA 
SDHVLSGASP DLAAADADLA PLVDEGLLRR VVELVPDEWL VDEPGFDGPG DVRAAYVRYL 
LARVAERSWL PEVTG