Gene Ndas_1874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1874 
Symbol 
ID9245724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2287806 
End bp2288609 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content61% 
IMG OID 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003679808 
Protein GI297560834 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCCCA AGATCACTGC TTCTCAGCAG GCCGCAATGA ATCAGTTCGG CGCAACGCTG 
CGACAAATGA GAGAATTGGC TGATTTGTCC CAAAAGAAAC TAGGTGTTCT CACTCGAACC
TCCAAGCAGC AGGTGGGGGC TATCGAACGC GGGGAACGGA GGCCGTCCAA GGAGTTCGCG
AAGCTTGCAG ATGCTGCCCT GGAAGGCCAC GGTTCACTGC TCGGTCTGTG GCCAGGGGCG
AGGCGTGCGC AGCCCTGGTG GCTCCAGGAG TTTGTGGTCA TCGAGGAGAA AGCCCAGGTC
ATCCAGGAAT TCCAACCTCA GGCTGTGCCC GGGCTGCTTC AGACTGAGGA CTACGCACGC
CAGGTAGTGA GTGCAGCGTT CCCTCCGCTG GGAGCTGAGG AAAGCGAGCA ACTCCTGCAG
TCGAGGATGG AGCGGCAGGC GATTCTTGAC AGGCCGAAGC CTCCCCTCGC CATGTTTGTC
ATCGAGGAAG GGGCACTGCG CCGCACGGTC GGTTCCCCGA GTCTCATGCA AGCACAGAGG
GAAGTCCTTC TCCGCAGGGC TAGGCAGCCT CACATCGAGG TGCAGGTGGC TCCGTACCAT
CGCGGTGCGC ATGGTGCCAT GGATGGGGCG TTCATGGTGA TGCGGATGTC GTTCGCGGAG
TACCTGGTGT ACGCAGAAGT TCCGGGCAAG GGTCAGATCA TCACGGACGC CGAGGTCGTG
GCAGACTGCC AACAGCGGTT CGGGGCGCTT CGTAGTCTGG CGCTCTCACC CGCTGAAAGC
ATCGACTTCA TCGCGTCGCT TTGA
 
Protein sequence
MPPKITASQQ AAMNQFGATL RQMRELADLS QKKLGVLTRT SKQQVGAIER GERRPSKEFA 
KLADAALEGH GSLLGLWPGA RRAQPWWLQE FVVIEEKAQV IQEFQPQAVP GLLQTEDYAR
QVVSAAFPPL GAEESEQLLQ SRMERQAILD RPKPPLAMFV IEEGALRRTV GSPSLMQAQR
EVLLRRARQP HIEVQVAPYH RGAHGAMDGA FMVMRMSFAE YLVYAEVPGK GQIITDAEVV
ADCQQRFGAL RSLALSPAES IDFIASL