Gene Ndas_1815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1815 
Symbol 
ID9245665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand+ 
Start bp2220915 
End bp2221874 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content73% 
IMG OID 
ProductVTC domain protein 
Protein accessionYP_003679749 
Protein GI297560775 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.235458 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTACCAC CACGCGACCC CGGTCCCGCC GGGAACGCCG GGAACGCCGG GCACGCCGCG 
AAGGCCGCAC CGGCCGGTAC CCCGACCGGC ACCGCCGCCG GGGACCGGCT GAGGGCGCCG 
AGCAGGCTCC ACGCCTTCAA CCGCTACGAA CTCAAGTACC TCGTCCCCGC CGACCAGGCC 
CGGGACGTGC GCGCCGAACT CACCGCGCGC ATGCGGGCCG ACCGCAATGC CGGGCCCGAC 
GGCTACGGCG TGTGGAGCCT GTACTACGAC ACCGACCGGC TGCGCTTCTA CCATGAGAAG 
ATCGAGGGCC TGAGGTTCCG CCGCAAGCTG CGCGTGCGCC GCTACGGCGA GGTCGGCCCG 
GCCGCCGAGG ACACCCCCGT CTCCGTCGAG ATCAAGCAGC GCGTCAACCG CGTCACCCAG 
AAGCGCCGGG TCATGCTGCC CTACCACCTG GCCCGCGACC TGTGCGACCG GCGCGTGCGC 
GTGGAGCACC CCGGCGCCGA CCAGGCCTTC GTGGACGAGG TCCTCGACCT CGTCCACCGC 
CTGGACCTGC GCCCGACCGC GATGACCGGG TACCGGCGCG AACCCTACGT CGGCACCGGC 
TCCGACCTGG GACTGCGCGT GACCCTGGAC CACCGTGTGC GCGGGCGCGA CCGGGACTTC 
GACCTGCGCG CCGAGGCCGA GAGCCGCTAC ATCATCAGCC CGCACCTGGC GGTCATGGAG 
GTCAAGGCCA ACGAGCGCGC CCCCTACTGG GTCACCGACA TGGCCGCCCG CTTCGGCCTC 
CAGGTGCAGC GCGTCTCCAA GTACTGCCAG AGCGTGGAGG CCCACGGCAT GGCCCCGCGC 
TCGGTCTTCC ACCTGCCCGA GGAGGACGTC GTGGCCGAGG CGCGTCCGCT CGGTTCCGTG 
GTCGAAGCGC CTCCGCCCGT CCCCACGGCC GGGGGCGCGT CCTCCGGCCC CCGTTCCTGA
 
Protein sequence
MVPPRDPGPA GNAGNAGHAA KAAPAGTPTG TAAGDRLRAP SRLHAFNRYE LKYLVPADQA 
RDVRAELTAR MRADRNAGPD GYGVWSLYYD TDRLRFYHEK IEGLRFRRKL RVRRYGEVGP 
AAEDTPVSVE IKQRVNRVTQ KRRVMLPYHL ARDLCDRRVR VEHPGADQAF VDEVLDLVHR 
LDLRPTAMTG YRREPYVGTG SDLGLRVTLD HRVRGRDRDF DLRAEAESRY IISPHLAVME 
VKANERAPYW VTDMAARFGL QVQRVSKYCQ SVEAHGMAPR SVFHLPEEDV VAEARPLGSV 
VEAPPPVPTA GGASSGPRS