Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_1786 |
Symbol | |
ID | 9245636 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 2184782 |
End bp | 2185342 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | transcriptional regulator, PadR-like family |
Protein accession | YP_003679720 |
Protein GI | 297560746 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.335801 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGCGTG TGGAGCTGAC ACCCGCCGAA CTCACCGTCC TGGGCCTGGT CATCGAGCGT CCCCGGCACG GCTACGACCT GGAACAGGCC ATCGAGCTGC GCGGCGTCCG CCAGTGGACG GACATCGGCT TCTCCTCGAT CTACTACCTG CTCGCCAAAC TGGAGAAGCG GGGCCTGGTC CACGTCCCGC AGGCCCCCGC CGCCGCGAAG TCGCGCCGGG TGTTCCACGC CACCGACACC GGAAGGCGGG CGGCGCGCGA CGGCGCGCTC GACCTCATCC GACAGCCGCG GCCGGTGGCG CACCCGCTAC TGGTAGGCGT CGCCAACCTG CCCCTGCTCT CCGAACGCGA GTACGCCGAG GCGCTGCGCG ACCGGCTGGC CGGGGTGTGC GAGCGCATCG CCGCGGTCCG GGAGGCCGAG CGGGCGCAGG CGCCCTCCGC GCTCGCGGCG CGCGAGGTGT TCTCGTACTC ACTGAGCCTC CTGGAGGCGG AAAGGTCGTG GCTCGCCAGC CGAGTCCAGG CGCCTGATGA CGGACAAGAC CGACTTCAAG AAAACCCTTG A
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Protein sequence | MRRVELTPAE LTVLGLVIER PRHGYDLEQA IELRGVRQWT DIGFSSIYYL LAKLEKRGLV HVPQAPAAAK SRRVFHATDT GRRAARDGAL DLIRQPRPVA HPLLVGVANL PLLSEREYAE ALRDRLAGVC ERIAAVREAE RAQAPSALAA REVFSYSLSL LEAERSWLAS RVQAPDDGQD RLQENP
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