| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_1770 |
|---|
| Symbol | |
|---|
| ID | 9245620 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | + |
|---|
| Start bp | 2168060 |
|---|
| End bp | 2168923 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily |
|---|
| Protein accession | YP_003679704 |
|---|
| Protein GI | 297560730 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.283313 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTCCACCA CGTTGAACAA GGACACCGTG TCGCAGGCCG ACACCGACCA CACGACCCTC
GTCCCCAGGA CGCGCACGTC CTCGCCGGTT AAGGAGATCC CGGCCGAGGA ACTCCTCGCC
GAACTCCACG GTCTGGACGA CGACGACCCG CGCGCGGTCA GGCTGCGCGA GGAGGTCGTG
GTCCGCTACC AGCCGCTGGT CAACAAGCTC GCCCGCCGCT ACAACGGCCG AGGTGAGCCG
TTGGAGGACC TCAAGCAGAC CGCCATGGTC GGCCTGGTCA AGGCCATCCG CGGCTACCGG
CCCGACCGCG GCAAGCCCTT CATCTCCTAC CTGATGCCCA CGGTCACCGG TGAGATCAAG
CGGCACTTCC GCGACCACAC CTGGGCGATC CGGGTTCCCA GGCGTCACCA GGAGAACCGG
ATCAAGCTGC GCCAGGTCCT CAACACCTTC CAGCAGACCC ACGCGCGCGT CCCCACCAAC
GCCGAGATCG CCAAGGAGAT GGGGCTGGAC GAGGAGGAGG TCGTCGAGCT GGTCCAGGCC
TCGGAGTCCT ACCGCTCCCT CTCGCTGGAC GCCCCCGACT CCTCCGACTC CGACGGCCAG
GAGGGCTCCC GCCTGGAGGA CCACCTGGGC AGCGAGGACG AGGGCCTGGA GCGGGTCGTG
CAGCGCGAGT CGCTCAAGCC CGCCCTGGCC CGTCTGCCCG AGCGCGAGCG CGAGATCCTC
AAGCTGCGCT TCTTCGGCGA CCACACCCAG ACCGAGATCG CCGACCGCAT GGGCTACTCC
CAGATGCACG TCTCCCGGCT GCTGAAGAAC ACCCTGGAGC AGCTGCGCGA GGACGTGGGC
GAGCGCGGTC CCGCCCGGGG CTGA
|
|---|
| Protein sequence | MSTTLNKDTV SQADTDHTTL VPRTRTSSPV KEIPAEELLA ELHGLDDDDP RAVRLREEVV
VRYQPLVNKL ARRYNGRGEP LEDLKQTAMV GLVKAIRGYR PDRGKPFISY LMPTVTGEIK
RHFRDHTWAI RVPRRHQENR IKLRQVLNTF QQTHARVPTN AEIAKEMGLD EEEVVELVQA
SESYRSLSLD APDSSDSDGQ EGSRLEDHLG SEDEGLERVV QRESLKPALA RLPEREREIL
KLRFFGDHTQ TEIADRMGYS QMHVSRLLKN TLEQLREDVG ERGPARG
|
|---|
| |