Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_1651 |
Symbol | |
ID | 9245501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 2022581 |
End bp | 2023399 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | transcriptional regulator, XRE family |
Protein accession | YP_003679586 |
Protein GI | 297560612 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.115849 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAAGAAG AAGATGCCGA CAAGGCTGCA CAGCTTCGTT TCGGCAAGTT GCTCCGCAAA CTCCGAGGTC AGGCGGGTCT TACTCAGCAG GAACTCGCTG CCCTGGCCGT GGTGTCACAG AGCACCGTCA GCGATTTGGA ACGCGGGAAA AAGGGGACAC GGAGAGATCC AGTAGTACGA CTCGACAAAG CCCTTACCGC CCGGGGCATG CTCGTGGACG CGTGGGACGC GGTGTTCTCC GGAGTTGGGG TGACCGCGTA CTTCCGTGAG GTGGCCGAGG CGGAGCAGAT GGCTCTCAAG ATCCGCGACT ACTCCTACGG TCTGGTTCCT GGACTGTTCC AGGTCGAGGA GTACGTGCGG GCCATCAGTG AACTCTCCAA CCCCGAAGCC ACCACGGAGG CCATCGACCA GATCGTGAAG GCCAGGAAGT ACCGACAACA GATCCTGGAC CGGCCCCACC CGCCGACGAT CACGGTGCTC CTGGACGAGG TGGTGCTGCT GCGACGGTTC CGGAAGCCGG AGGTGATGAA GCAACAGATC GATCACCTCA TTGACCAGTC CTATCGCCCG CGAGTGAACC TCCAGATCGT GCCGATCGCG ACCGAGGGAC ATCCAGGTCT GTTCGGGTCC TTTAGGCTGA TCGACGTGCC TGATTCGAGC ACATTCGCCT ATATCGAAAG CCAGAGGACA GGGGTGTCAC TGAAGCAGCC GGACGTTGTG GCAAGCTACG ACCGGATATT CGCGGAGCTG AGGAGCGCCG CCCTGCCGGT GCCCTCGTCA CGGTCCCGCA TGGAAGAGAT TCGAGGCAGC ATCACATGA
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Protein sequence | MQEEDADKAA QLRFGKLLRK LRGQAGLTQQ ELAALAVVSQ STVSDLERGK KGTRRDPVVR LDKALTARGM LVDAWDAVFS GVGVTAYFRE VAEAEQMALK IRDYSYGLVP GLFQVEEYVR AISELSNPEA TTEAIDQIVK ARKYRQQILD RPHPPTITVL LDEVVLLRRF RKPEVMKQQI DHLIDQSYRP RVNLQIVPIA TEGHPGLFGS FRLIDVPDSS TFAYIESQRT GVSLKQPDVV ASYDRIFAEL RSAALPVPSS RSRMEEIRGS IT
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