| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_1374 |
|---|
| Symbol | |
|---|
| ID | 9245224 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | + |
|---|
| Start bp | 1688985 |
|---|
| End bp | 1690502 |
|---|
| Gene Length | 1518 bp |
|---|
| Protein Length | 505 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003679312 |
|---|
| Protein GI | 297560338 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.770006 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACA CCTCCGCCGC GCCCCCGGCC GACACCGACG TCGTGGCCCG TGTCCGCGGC
GCGACCAAGA GCTACCCCGG CGTCCGGGCG CTGGACCGCG CCGACTTCGA GATCAGTGCC
GGAGAGGTCC GCGCGCTGCT CGGACGCAAC GGCGCCGGAA AGTCCACCCT GATCCGCCTG
CTGTCCGGCG TGGAGACACC CGACGAGGGC GAGATCGAGA TCGGCGGCCA GCCGCTCGGC
CAGGGCGGCA TCCGCCGGGC GGCCAAGCTC GGCGTGGGCA CCGTCTACCA GGAGCTCAGC
CTGGTCCCGG AGCTGTCGGC GGCCGAGAAC CTCTACCTCG GCACGTGGCC CAAGGCCGCC
GGGCGCATCG ACTACGGCCG CATCAGGGCC GGGGCCGAGG AGGTCTTCGC CGAACTCGGC
GTCGACATCG CCCCCGACAC CCGGGTCGGC GAACTGCCCC TGGCCCAGCA GCAGCTCGTG
GAGATCGCGC GGGCCTTCCG CGCCCGGCCG CGCCTGCTCA TCCTCGACGA GCCCACCAGC
GCGCTCGCCG CCGGTGAGGC CGAGACCGTC CTCAAGGCCG TCGAGCGCGT CGCCTCCCGC
GGCGTCGGCG TCATCTACGT CAGCCACCGC CTGGACGAGA TCCGCCGGGT CGCCGACACG
GTCACCGTCA TGCGCGACGG CGCCGTCGTG GAGACCACGC CGGTCCGCGG CGCCACCACC
CGGCACATCG TCTCCCTCAT GCTCGGAGGC GAGACCAAGG AGGAGAACAG GCCGGTGCGC
CGCGCCGCCG CCTCCGGAAC ACCGCTCCTG TCGGTCCGCG ACCTGGCGGT ACCGCCCAAG
GTCGACGGCG TCTCCTTCGA CCTGCACCCC GGCGAGGTCC TGGGCCTGGG CGGCCTCATG
GGCTCGGGGC GGACCGAGAT CCTGCGCGCG CTCGCGGGCT TCACCCCCTC ACGGGGGACC
GTGGAGGTGG ACGGCTCGCC GGTGGCCCGC CCCACCCCCC GCGCGATGAA GCGCCTGGGC
GTGGGCATCA CCCCCGAGGA CCGCAAGGGA GAGGGCGTCG TCCCCCTCCT GGGCGTCTCC
GAGAACATGG TCATGACCTG GTTCGGCGGA GCCTCCAAGG CGGGGACCGT GCTCCCCTCC
CGCGTCTCGG GGATCGGCCG GGGCCTCATC GACCGGCTCT CGATCAAGGC CGCCGCGACC
GACACCCCCA TCGTCAACCT CAGCGGCGGC AACCAGCAGA AGGCCGTCAT CGGCCGCTGG
CTGCACGCCG GGAGCCGCAT CCTGCTGCTG GACGAGCCCA CCCGCGGCGT GGACGTCGAG
GCCAAGGCCC AGATCTACGC CATCGTGCGC GAGCTGGCCG GACAGGGGGC CGCGGTCCTC
TTCGTCTCCA GCGAACTGGA GGAGCTCCCG CTCGTGTGCG ACCGCGTGCT CGCCCTGCGC
GGAGGACGGC TGCAAGGCGA GTTCACCGGC GACGACATCA CCCTGGACAA CATCATGGCC
GCCGCGATGG CGGCGTGA
|
|---|
| Protein sequence | MSDTSAAPPA DTDVVARVRG ATKSYPGVRA LDRADFEISA GEVRALLGRN GAGKSTLIRL
LSGVETPDEG EIEIGGQPLG QGGIRRAAKL GVGTVYQELS LVPELSAAEN LYLGTWPKAA
GRIDYGRIRA GAEEVFAELG VDIAPDTRVG ELPLAQQQLV EIARAFRARP RLLILDEPTS
ALAAGEAETV LKAVERVASR GVGVIYVSHR LDEIRRVADT VTVMRDGAVV ETTPVRGATT
RHIVSLMLGG ETKEENRPVR RAAASGTPLL SVRDLAVPPK VDGVSFDLHP GEVLGLGGLM
GSGRTEILRA LAGFTPSRGT VEVDGSPVAR PTPRAMKRLG VGITPEDRKG EGVVPLLGVS
ENMVMTWFGG ASKAGTVLPS RVSGIGRGLI DRLSIKAAAT DTPIVNLSGG NQQKAVIGRW
LHAGSRILLL DEPTRGVDVE AKAQIYAIVR ELAGQGAAVL FVSSELEELP LVCDRVLALR
GGRLQGEFTG DDITLDNIMA AAMAA
|
|---|
| |