Gene Ndas_1080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1080 
Symbol 
ID9244926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand+ 
Start bp1327056 
End bp1327826 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content73% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003679028 
Protein GI297560054 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.990505 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0894269 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGCA GCGACACGAC CGCAGCCCAG AACCTCCTCG ACTCCCCCGA GCACACCGAC 
CCGAACACCT CCCCGGACGG AGTGACCATG ACCGAGCACC TCCCCGCCCA GCCCCGGCAG 
TCCCCCGGCC CCGCCCAGCC CGTCAGCGCC AAGCAGGCGG CGATGGACGC CGCGGGCGGC 
CCGTGGGGCA TGGTCCTCTC GGCGATCCCG GCCCTGGTCT TCGCGGGGGC CATCGCCTTC 
GTCCCGCCGC TGGTCGCCGT CGGGATCGCG ATCGCTCTGG CCGTGGTGAT CGCCGTGGTG 
CAACTCTGGC GCGGCAAGCC CTTCAGCTCC GTGTACGGCG GGGTGCTCGG CGTCGTGATC 
GCCGGAGGCA TCGTCGCCTG GACCGGTTCG GCCAACGACT TCTTCGTGAT CGGGATCTGG 
GCCGCCCTGG CGCTGGGCGC GGCCACGCTC GCCACGACCC TCATGAACCG GCCGGCGACC 
GGCGTCATCT GGAACGCCGT GCACGGCGGC ACCCACGCCT GGCGTGAGGA CCGGCCCACG 
CTGGTCGCGC ACCACGCCGC CACGTTCGCG GTGCTGGCCA TGTGCGTGCT GCGCTTCGTG 
GTGCAGGGCT GGCTCTACCT GGCCGACTCC ACCGCCGGGC TGGCGATCGC CGACACCCTG 
ATGGGCTTCC CGCTGACCGC CCTGGTCGCC GTGGTGGTCA TCTGGGCGTT CCGCCGCTCC 
ACCAAGCGCC TGATCAAGTC CTCCGGCTCC GAGGCCGCCG AGCGGAGCTG A
 
Protein sequence
MARSDTTAAQ NLLDSPEHTD PNTSPDGVTM TEHLPAQPRQ SPGPAQPVSA KQAAMDAAGG 
PWGMVLSAIP ALVFAGAIAF VPPLVAVGIA IALAVVIAVV QLWRGKPFSS VYGGVLGVVI 
AGGIVAWTGS ANDFFVIGIW AALALGAATL ATTLMNRPAT GVIWNAVHGG THAWREDRPT 
LVAHHAATFA VLAMCVLRFV VQGWLYLADS TAGLAIADTL MGFPLTALVA VVVIWAFRRS 
TKRLIKSSGS EAAERS