| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_1047 |
|---|
| Symbol | |
|---|
| ID | 9244893 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | + |
|---|
| Start bp | 1291425 |
|---|
| End bp | 1292243 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003678996 |
|---|
| Protein GI | 297560022 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.674446 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.338405 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCC CACCGCTGCT GAGCGTGCGC GACCTGGTGG TGCGCTACCC GGGCCGCACC
CGGCGGGCCG CCCCGGTCAC GGCCGTCGAC GGGATCTCCT TCGACATCGG CGCGGGGGAG
ACGCTCGCCC TGGTCGGGGA GTCGGGGTGC GGCAAGTCCA GCACCGCCGC GGCCGTGATC
GGACTGCGCC GGCCCCAGGG CGGGACGGTG CTCTTCGGGG GCCGGGAGCT GACCGCCATG
GGCGAGAGGG AGCTGCGCGC CCTGCGCCCC GCGATCCAGC CGGTGTTCCA GGACCCCTAC
GGCTCGCTCA GCCCGCGCCT GCGCGTGCGC GACGCCGTCG CCGAACCCCT GCGCATCCAC
GGCCGCTGGG ACCGCGCGAC CGGTCCCGCC CGGGTGGCCG AACTCCTGGA GAAGGTCGGA
CTGGACCCCG CGCACGGCGA CCGGCTGCCC CACGAGCTCT CCGGCGGGCA GTGCCAGCGG
GTGGGGATCG CCCGCGCGCT GGCCTGCGAG CCGCGCCTGC TGGTCCTGGA CGAACCGGTG
TCGGCCCTGG ACTCCTCCGT GCGCGCCGGG GTGCTCAACC TGCTCACCGG CCTCCAGGAC
GAACTGGGGC TGGGCTACCT GTTCATCTGC CACGACCTGG CGCTCGTCGG GCACGTCGCG
CACCGCGCGG CGGTCATGCG CGCGGGACGG CTGGTGGAGA CCGGCCCCGC CCATCGGGTG
TGCTCCGACC CCGCCGACCC CTACACCCGC GAACTGGTGG AGGCCGTACC GGCCCTCCCC
GGCGCCTCCG GGGACCGGCC GCTGCCGAGC GCCCCGTGA
|
|---|
| Protein sequence | MTTPPLLSVR DLVVRYPGRT RRAAPVTAVD GISFDIGAGE TLALVGESGC GKSSTAAAVI
GLRRPQGGTV LFGGRELTAM GERELRALRP AIQPVFQDPY GSLSPRLRVR DAVAEPLRIH
GRWDRATGPA RVAELLEKVG LDPAHGDRLP HELSGGQCQR VGIARALACE PRLLVLDEPV
SALDSSVRAG VLNLLTGLQD ELGLGYLFIC HDLALVGHVA HRAAVMRAGR LVETGPAHRV
CSDPADPYTR ELVEAVPALP GASGDRPLPS AP
|
|---|
| |