Gene Ndas_0890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_0890 
Symbol 
ID9244735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp1088527 
End bp1090494 
Gene Length1968 bp 
Protein Length655 aa 
Translation table11 
GC content73% 
IMG OID 
ProductPeptidoglycan glycosyltransferase 
Protein accessionYP_003678840 
Protein GI297559866 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.641188 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.46812 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTACTC CCAGAGACCG GCGTCCCCGG AACCCCCGCA GGCCCGGAGC GGCCAACCGC 
TCGGGGTCCC GGCCCAAGAG GCCCCAGCGC GAGCCGCGCC GCCCCGACGG CGGCGCCCGC
CCCTCGGCGC GCACCCCGGG GCGTCCGGCG CGGGAGGCGC GCGGCGGTGA GCGCCGCCGC
GGCGGGGGCT CCCCGCCCCC GCTCCCGCCC CTGCTGCGCC GCACCTTCCG CAGGGGCGAG
CCGCCGGGCC GCATCAAGAT CGGCGGGGCC CTGATCACGG CCGTCCTGCT GCTCTTCGCG
GGACGCCTGG TGCAGATCCA GGTCGTGGAG GCCGAGCACT ACGCCGAGGC GGCCTCCAAC
ACGCGCCTGC AGACCATCGA CATCCCCACC CTGCGCGGTC AGATCACCGA CGCCGACGGC
AACCCCTTCG CGCTGTCGCT GGAGGTGCGC ACCGTCTTCG TCGATCCCGA GACGGTCGCC
GAGGACGAGC GTGACCAGCT CGTCGAAGAG CTCGTCACCC GCTTCGACCT GGAGGAGGAC
GAGGTCGCCC AGAAGGTGGA CGCCGCGCCC AGCCGCTACG AGGTGGTCGC CCGCGGGGTC
CTGCCCGCGG AGTGGGAGGA GCTGGCCGAC CTCAACCTGT CCGGCCTGGG CTCGCAGGTC
TCCTACGAGC GCGTCTACCC CGAGGAGACC GGCGCCGCCG ACCTCGTCGG CTTCGTCGGC
GCCGAGGGCC ACGGCCTGGA GGGACTGGAG GGCTACCTCA ACGACACCCT GGCCGGTGAG
GCGGGCAAGC GCCGCGTTGA GGTGGGCGCC GACGGCACCC AGATCCCCAT GGCGGGCGGC
CTGGTCAGCG AACCCGAGCC GGGCCAGGAC GTGCGCCTGA CCCTGAACCA GGACATCCAG
TGGTACGCGG CCCAGACCCT CGCCGAGCGC GTGGAGGAGC TGGACGCCCA GGGCGGCAGC
GTCATCGTGG AGCGGGTCGG CACCGGTGAG ATCCTCGCCA TGGCCGACTA CCCGACCTAC
TCCCAGAGCG ACATCTCCTC CAGCTCCCCC GAGCAGTGGT CCAACGGCGC GGTGGCCACG
ATCTTCGAGC CGGGCAGCAC CAACAAGGTC GTCACCATCG GCGCCGCGCT GGAGGAGGGC
GTCACCACCC CGGAGACGGT CTACACCGTG CCCGACAGCA TCCGGTACCT GGACACGACG
TTCAAGGACT CCAGCCCCCA CGAGACCCTG CGCCTGACCA CCAACGGCAT CATGGCCCAG
TCCAGCAACG TGGGCACCAT CGAGATCGCC GACCAGGTGG GGCGGGGCGT CCTGCACTCC
TACCTGGAGG ACTTCGGGCT CGGCCAGCCG ACCGGGCTCC AGCTGCCCGG TGAGCAGGCG
GGCGTGCTCA AGGACCCGGA GGACTGGTGG GGCACCCAGC TGCCGTCGGT CTCCATCGGC
CACGGCCTGT CGGTGACCGC CGCTCAGATG GCGTCGGTGT ACGCCACCGT CGCCAACGGC
GGTGTGCGGG TGGAGCCCCG GGTGGTCGCC GGGACGGTGA ACGCCCAGGG GGAGTTCACT
CCGTCCGAGG AGCCCGAACA GCGGCGCGTG TTCAGCGAGG AGACCGCCGA TCAGCTCGCG
CTGATGCTGG AGGCGGTCAC CAGTGACGAG GGCACCGCGC CCCAGGCCCG CATCGACGGG
TACCGGGTCG CGGGCAAGAC CGGTACCGCC AACCGGCTCG ACCCGGAGAC GGGCGACTAC
GACGGCGGCG GGTACACGTC CACCTTCTCC GGGTTCGCGC CCGCCGACGA CCCGGAGGTC
GTGGTCCAGG TGGTGCTGCA CGACCCGCAG CAGGACTACT ACGGCGGCGA GGCCGCGGGG
CCGGTGTTCA ACGACGTCAT GTCCTTCGCG CTCAAGACGC TGAAGGTCCC GCCGTCGGGG
ACCGAGGCGC CCGCCATCCG GCTGTCGGAG GACCAGGGCG GCGGCTAG
 
Protein sequence
MSTPRDRRPR NPRRPGAANR SGSRPKRPQR EPRRPDGGAR PSARTPGRPA REARGGERRR 
GGGSPPPLPP LLRRTFRRGE PPGRIKIGGA LITAVLLLFA GRLVQIQVVE AEHYAEAASN
TRLQTIDIPT LRGQITDADG NPFALSLEVR TVFVDPETVA EDERDQLVEE LVTRFDLEED
EVAQKVDAAP SRYEVVARGV LPAEWEELAD LNLSGLGSQV SYERVYPEET GAADLVGFVG
AEGHGLEGLE GYLNDTLAGE AGKRRVEVGA DGTQIPMAGG LVSEPEPGQD VRLTLNQDIQ
WYAAQTLAER VEELDAQGGS VIVERVGTGE ILAMADYPTY SQSDISSSSP EQWSNGAVAT
IFEPGSTNKV VTIGAALEEG VTTPETVYTV PDSIRYLDTT FKDSSPHETL RLTTNGIMAQ
SSNVGTIEIA DQVGRGVLHS YLEDFGLGQP TGLQLPGEQA GVLKDPEDWW GTQLPSVSIG
HGLSVTAAQM ASVYATVANG GVRVEPRVVA GTVNAQGEFT PSEEPEQRRV FSEETADQLA
LMLEAVTSDE GTAPQARIDG YRVAGKTGTA NRLDPETGDY DGGGYTSTFS GFAPADDPEV
VVQVVLHDPQ QDYYGGEAAG PVFNDVMSFA LKTLKVPPSG TEAPAIRLSE DQGGG