Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_0675 |
Symbol | |
ID | 9244517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 828516 |
End bp | 829331 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003678626 |
Protein GI | 297559652 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.886772 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.300779 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAGATAT GGTCATCGGC GTCAACACGC GTGGTCAGCG ACACCTCGCA CGCCCTCGAC TCGCAGGAGT ACACCGTGGC CCCATCCACA TCCCCGACCG CCAGCGAGCG CGAACTGCGC GCCGACCGCA TCCTGGACGC GGCGGAGGAG CTGATGGTCG CCTGGGGGCA CCGCAAGATC ACCATCGAGG ACGTCGCCCG GCGGGCCAAG ATCGGCAAGG GGACCGTCTA CCTGCACTTC TCCACCAAGG AGGCGCTTCT CCTCACGGTG GTCATGCGGG CGCAGCTCGG CGTGCTGCGC CGGATCCTGG ACTCCATGCA CGCCTCACCC GAGAACGTCC GACCCAGCGA GGTCGCCCGC GCCCTCTACC TGTTCCACCT GGACTCGCCG ACCATCCGCG CGCTGTTCTC CAACGGCACG GAGTCCCTGG GCAACCTCTC CCGGAACGCG GCCTCCCTGG TCGGCGACAC CGTCCGGGAG CGGCAGAGGG CGCTGCGGAC CTATTGGGAC ATCCTGCGCG AACACGGCCT GCTGAACGCC GACCGCGCCC CCGACGAGCA GCTGTACGCC TACAACTCCC TGGTCATGGG CCACCTGGTC ACACCCCCGG TGCTGGAGAG CCAGGGCATG CACGTGCCCG ACCACGGCAC GCGCGCCGAG CTCATGGCCC GGAGCATCCG ACTGCTCCTG GAACAGGACG CCTCCCCGGA GGACACCCGC CGGGCCCGGG ACAGGGCCCT GGCGCTCTTC TCCGCGCTGG ACGAGCGCCT GCACGAGGAG ATCACCCGGC AGAAACAGAC GACACGCTCC ACCTGA
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Protein sequence | MEIWSSASTR VVSDTSHALD SQEYTVAPST SPTASERELR ADRILDAAEE LMVAWGHRKI TIEDVARRAK IGKGTVYLHF STKEALLLTV VMRAQLGVLR RILDSMHASP ENVRPSEVAR ALYLFHLDSP TIRALFSNGT ESLGNLSRNA ASLVGDTVRE RQRALRTYWD ILREHGLLNA DRAPDEQLYA YNSLVMGHLV TPPVLESQGM HVPDHGTRAE LMARSIRLLL EQDASPEDTR RARDRALALF SALDERLHEE ITRQKQTTRS T
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