Gene Ndas_0669 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_0669 
Symbol 
ID9244511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp821804 
End bp822946 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content72% 
IMG OID 
Productpolar amino acid ABC transporter, inner membrane subunit 
Protein accessionYP_003678620 
Protein GI297559646 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.446629 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.180357 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGC AGAGCTCCGT CCTCTTCGAC GCGCCCGGCC CCAAGGCCCG CAGGCGCAAC 
GCCCTCTACA CGGTCGTCAC GGTGTTCCTG GCCCTGATCG GCCTGGCCGT CCTGTATCTG
GGGTTCAACG GCACCCTGCG CGACACCGGG TTCTCGCTGT TCAACCCGCT CACCTGGGGG
CCGCTGGGCG ACCCGGCGAC CTGGGCGGTC AACCCCGCGG GCGAGTGGGC CTCGGACAAG
TGGGCGCCGT TCCTGCAGCC CGCCACCTGG ACCGACTACG TCGTCCCGGG CCTGCAGAAC
ACGCTGACCG CGGCGCTGAC CGCCTCGGTC CTGGCCATCC TCTTCGGCCT GGTGTTCGGC
ATCGGCCGCC TGTCCGACAA GTGGTGGATC CGCGTTCCGG CCGGGGCCGT CGTGGAGTTC
TTCCGCGGCA TCCCGCTGCT GATGCTGATC TTCTTCACGA TGGCGCTGCC CATCGTGGCC
TACCAGATGT TCGACATCCC CGCGGGCACC TTCCAGGTCT CGGCGCTGGC CGCCGTCGTC
ACGGGTCTGA CCCTGTACAA CGGCTCCGTG CTGGCGGAGG TCTTCCGCGC GGGCGTCCTC
GCGGTGCCCA AGGGCCAGTC CGAGGCCGCG CAGGCCATCG GGATGACCCG GGGCCAGAAC
ATGCGGCTGA TCCTCATCCC GCAGGCGATC ACCGCGATGA TGCCCGCGAT CGTGGCGCAG
CTCGTGGTCC TGCTCAAGGA CTCCGCACTG GGCTACATCA TCGCCTTCCC CGAGATGCTG
CGCAGCTTCA CCCTGCTGGC CACGCGCGAG GGCAACGTGA TCCCGGCCGC GATCATCTGC
GCGGCCATCT ACATCGCCAT CAACCTCTCG CTGAGCCGGG TCGCGATCTG GCTGGAGCGG
CGCAACGCCC GCCGCGGTCG GCCCTCGGCC AAGCCCACCG GCGGCGGGGA CATCCCGGCC
CAGCCCGTGG CCGCGCCCGG GGGCGGCACC GGAGACGGCA GCGCCAAGGC CGAGGGCCCC
GCCGGGTCCG TGGCGGTGGA GCCCACCGTG CAGGAGCCGC TGCCCGACGC GCTGGACGGG
TCCCGCCCGG CGAAGTCCGG CGACGGCGAC GACCCGGACG GCAGGGCGGA CCGGAAGGAC
TGA
 
Protein sequence
MSAQSSVLFD APGPKARRRN ALYTVVTVFL ALIGLAVLYL GFNGTLRDTG FSLFNPLTWG 
PLGDPATWAV NPAGEWASDK WAPFLQPATW TDYVVPGLQN TLTAALTASV LAILFGLVFG
IGRLSDKWWI RVPAGAVVEF FRGIPLLMLI FFTMALPIVA YQMFDIPAGT FQVSALAAVV
TGLTLYNGSV LAEVFRAGVL AVPKGQSEAA QAIGMTRGQN MRLILIPQAI TAMMPAIVAQ
LVVLLKDSAL GYIIAFPEML RSFTLLATRE GNVIPAAIIC AAIYIAINLS LSRVAIWLER
RNARRGRPSA KPTGGGDIPA QPVAAPGGGT GDGSAKAEGP AGSVAVEPTV QEPLPDALDG
SRPAKSGDGD DPDGRADRKD