Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_0618 |
Symbol | |
ID | 9244460 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 757458 |
End bp | 759470 |
Gene Length | 2013 bp |
Protein Length | 670 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | glycosyl transferase family 2 |
Protein accession | YP_003678571 |
Protein GI | 297559597 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.958983 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTACCA CCGCCCTGCG GCAGGCACTG CGCGCCCGTG GCACCGAGGC CGCCGTGCTC TGCCACGCGG GTGCCGACAC CCGCTCCGTC CTGGCCGAGC TGCCGCTACG CCCCGACGAC ATCCTGGTGG ACCTGGACGC CCACCCCCTG GGCCGGCCCC TGGAGCTTCC GCGCGCCTGG ATGCGGGACG AGGAGCCCGA GGTCGGTCTG GTCGCGGTCG TGGCCGCCAC GACCACCGAC CTGCACCGCG CCCTCACCGT CTCCACGCAC CTTCCCAGAG CCGTGCACAT CGTGGTCGCC ATGGTCGCCA CGTCCGGCCA CCAGGAGCCC CCGATCCCGG CCTCCCCGGG CATGGGCCAG TGGCGCGAGC TCCAGGAGGT GCGGGTCCGC CGCGTCAACA GGAACGGCTG GCTGTGCGAG CTGTTCTTCC CCAACGGGAT GGACACCGTC CAGGTGGTCG ACGCCGTCGT GCACGGCACC CGGGGTCGGC GCCGGGGGCC GGCAACCGCG CCGCTGGCCG TCCTCAACGG GCCCGAGGCC GCCCTGTGGC GGCCGGGCGA CACCGGCGTG CGGGGCGTGG AGGCACAGGG GCCCGTCCCG CTGCGCCGGG TGACCCCTGT GGGGGACCTG GCGCTGCGCG TGTCCGACGA CGTCGCGCGG CCCGAGTGGA CCGACCCGGT CGTCCCCGTC CTGGACCGCG CCACCACCGC CGCCGACTCC TGGGCCCGGA TCTCCGGGCC GGACGGGCAC GTCCGGGCCC ACGAGGCGGT GCCGGACAGC GCGCACGCGG TCGCGCCCGT GGACGAGCTC ACCGTCAACC CCACCGGGTT CACCAGGGTC AAGGACGGGA ACCTGGCCGA CCTCACCGTC CACGGCCCCC ACGCCGTGGT CAGGGAGGGC GGCAAGGACC TGGTCACCGT CGCCGCCGAC GGCACGGTCA CCGACGTCGA CCTGGCACGC CTGCGCCACC TGCGCGGGGT CAGGGTGGAC TGGTCCGGGC ACACCGGACC CAGCGCCGCC GTACGCGCGG TCGCCTCCCT GGCCGCCGGC GGGGTGCCCC TGATCAGCGG CGAGGTGCCC GCCTGGGCCT CGGGCCTGGG CGCGCCGCTC ACGGACCTGA TCACCGGCGC CCGCGACGAG GACCTGCGCG ACCAGCTGCG TCGTGAGGAG TACAGCGTCC GCCTGCGCCG CACGGCCCTG CGCGCCCACG GCCAGCGCTC CCGCTGGCGG GCCCTGGGGG CGGAGGCCGG GATCCCCCTG CCCAGGGAGC CCCGGGTGTC GGTGATCCTG TGCACGCGCC GCCCCGAGAT GGTCGGGTTC GCGCTCGCCC AGATCGCCCG GCAGCGCGAC GTGGAACTGG AGGTGGTCCT CACCCTCCAC GGGTTCACGG CGGACCTGCC CGAGGTGCGC GCGGCGATCG ACGCGTTCCG GGAGACGGGG CTGCCGCTGG TCCTGCACGA GGCCGACGCG GGCCAGATCT TCGGCTCGGT GCTCAACGAC TCCGTCGACC GCGCCTCCGG AGACCTGATC TCCAAGTGGG ACGACGACGA CTGGTACGGC CCCGACCACC TGGCCGACCT GCTGATGGCG CGGACCTACT CCGGCGCCGA GCTCGTGGGC ACCGGACAGG ACTTCATCTA CCTCCAGGAG GTGGACCTGA CCGTCTGGCG CAACCGCAGG TCGGAGGCGG CGACCCGGTT CATCGCCGGG GGCACGATCC TCACCGACCG CGTGGTGATG GAGGAGATCG GCGGCTTCCG GCCGCTGCCC CGCGCCATCG ACACCCAGCT GCTCCTCGCC GTCATCCGGG GCGGCGGCCG CATCTACCGC GCCCATGGAC TCGGGTACGT GCTCCGCCGC ACCGGCGGCG GGCACACCTG GTCCGAGGAC ATGGCCTTCT TCCTGCACAA CCACACCCAG CAGTGGTTCG GCTGGCGTCC GAGCGCCATC GTGGAGGGCG AGCCCTCGCC CCTCGGCCAG CCCGCCACCG AGTACACGGG GGAGATCCGT TGA
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Protein sequence | MITTALRQAL RARGTEAAVL CHAGADTRSV LAELPLRPDD ILVDLDAHPL GRPLELPRAW MRDEEPEVGL VAVVAATTTD LHRALTVSTH LPRAVHIVVA MVATSGHQEP PIPASPGMGQ WRELQEVRVR RVNRNGWLCE LFFPNGMDTV QVVDAVVHGT RGRRRGPATA PLAVLNGPEA ALWRPGDTGV RGVEAQGPVP LRRVTPVGDL ALRVSDDVAR PEWTDPVVPV LDRATTAADS WARISGPDGH VRAHEAVPDS AHAVAPVDEL TVNPTGFTRV KDGNLADLTV HGPHAVVREG GKDLVTVAAD GTVTDVDLAR LRHLRGVRVD WSGHTGPSAA VRAVASLAAG GVPLISGEVP AWASGLGAPL TDLITGARDE DLRDQLRREE YSVRLRRTAL RAHGQRSRWR ALGAEAGIPL PREPRVSVIL CTRRPEMVGF ALAQIARQRD VELEVVLTLH GFTADLPEVR AAIDAFRETG LPLVLHEADA GQIFGSVLND SVDRASGDLI SKWDDDDWYG PDHLADLLMA RTYSGAELVG TGQDFIYLQE VDLTVWRNRR SEAATRFIAG GTILTDRVVM EEIGGFRPLP RAIDTQLLLA VIRGGGRIYR AHGLGYVLRR TGGGHTWSED MAFFLHNHTQ QWFGWRPSAI VEGEPSPLGQ PATEYTGEIR
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