Gene Ndas_0557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_0557 
Symbol 
ID9244398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp687891 
End bp689918 
Gene Length2028 bp 
Protein Length675 aa 
Translation table11 
GC content73% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003678510 
Protein GI297559536 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.60887 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAGC ACGACCTGTG GTGGCGCCGG CCCTTCCGGA TGTTCCAGAC CAACCTCAGG 
GAGATCGACG CGACCCTCGA CGTCGAACGG GTCCTGGACT ACCTGGAGGG CTTCGGCGCG
CGCGCCTGGC TCCTCAGCGT CGGCGGCATC GTGTCCAACT ACCCCACGGA GCTGGAGTTC
CAGACCCGCA ACCCCGCCCT GGACCAGCGG CCCTCGGGAG ACCTCGTGGG CGACGCGGTG
GCGGCGGCAC GCGAGCGGGG CGTGCGGGTC CTGGCCAGGA TGGACTTCTC CAAGATCGAC
CACCGCCGGG CCGAACGCCA CCCGGAGTGG TGCTTCACGG GGGCCGACGG GACGCAGCAG
GTCTACAACG GCCTGACCAG CGTGTGCCCC AGCGGGGACT ACTATCAGCA CCGCCTCCTG
GAGGTGGTCG ACGAGGTCCT GGACCGCTAC CCCCTGGACG GGTTCTTCTT CAACTGGATG
TCCTTCAACG AGGTCGACTA CAGCGGTGTC CACCGGGGGA CGTGCCACTG CCTGCCCTGC
CAGCGGGCGT TCGCGATCTT CGCGCCCGGA GTCGAGATGC CCACCGGGCC CGCCTCCCCC
ACCTACCGGG TGTGGAAGCG CTTCACCGAG GCGGTGCTCG ACGACCTGAC CTCCCGCGTG
CGCGACCACG TCAGCGCGCG CCGCCCCGAG GCGCCGCTCA TCCTCGGCGA CCGCGCCGAC
ATCGTCTTCC ACGAGGCCAA CAACGCGGTC GGGCGGACCC TGTGGCACCA TCGGACCGCC
GAGCACGTCA GCGCGGCCCG GACGTACCGG CCCGGGGTGC CCGTGCTCAC CAACGCCGTG
GGCTTCGTCG ACATGCCCTA CCGCCTGGCG GGCGAGGAGC CCCACCACTT CGCCCAGTAC
CTGGTCCAGG CCTTCTCCCG GGGGGCCAAC CCCTCCACGT ACATCATGGG GACCCCGGAC
GACGTCACCT ACGAGTGCCT GGACGCGGCC GGTGAGCTGA CCCGGTTCCA CCGTGACCAC
GAGCGCTTCT ACCGGGACCT GGTGTCCGCG GCCCGGGTCC TCCTCGTCCG GCCGGACCCG
CTCAAGCTCG CCCCCGCCCG GTGGGAGGAG GCCGTCCACG AGTTCCGGGG ACTGTACTCG
TCGCTCCTCG AACGCCACAT CCCCTTCGAC GTGCTGCCCG AGCCCCGTGT CCGCGACGTC
GACCGCCAGG GCCGACTGGG GGACTACGGG CTGGTCGTCC TGCCCGACCT GGGACCGCTG
GACCAGGAGA CGGTGGACGC CCTGGGGCGC TACGCCGAGG CCGGCGGCGG CGTGCTCGCC
ACCGGCACGA GCGGGTTCGA CGGTGACGCC TCCCTTATCG AGGGCTCACC GGTGCTGCGC
CGGACGGCGG TCCGGGACAC GGTCGAGTCC GTGCGCTCGC TGCACCTGCG CCGCCCCGGC
CGAGACGGCG CGCGACGCGG GGGCGACCTG CCCGTGGTGG GCGCCTTCCA CGTGGTCGAA
CCCGTCGCGG ACGCCGACAC CGACCTCCCC GTGCTGTCCC GTGCCCCCTA CGGTCCGCCC
GAGAAGTGCC ACGGCCACCT CCTCCTCGAC CACCCCGGCG CGCTGTGGCG CGCCCACGGG
CGCGGCCGGG TGGCCGTGCT GCCCTGGACG CCGGGCAGGG CCTACCACCA GCTGGGCCTG
AGCGGGCACC GCGACGTGTT CGTCGAGACC GCGCTGCGCG CGGCCAGCGG CCCGGTGGAG
GTCGACACCG ACCTGCCCGA GCAGGTCGAG GTGGTCCTGG GCGTCTCCGA GGCCGGGGGA
GTGGTCCACC TGGTCAACCA CTCCGGTGCC GTGCCCCAGG GGTTCCGCAC CCCGCTGCCG
GTCGACGGAC GCCGCCTGCG GGTGCCGTGG TGGACGGGCC AGCCCACCCG CGCCCTGCGC
GCCGACACGG ACCTGACGGT CGCGGAAAAG GGCGGCGAGG GCGTCGCGCT GCCCCGCGTC
GATCTCTTCG AGGTCCTGGT CACGGAGCGT CCCGTCAACG CCCGGTAA
 
Protein sequence
MNEHDLWWRR PFRMFQTNLR EIDATLDVER VLDYLEGFGA RAWLLSVGGI VSNYPTELEF 
QTRNPALDQR PSGDLVGDAV AAARERGVRV LARMDFSKID HRRAERHPEW CFTGADGTQQ
VYNGLTSVCP SGDYYQHRLL EVVDEVLDRY PLDGFFFNWM SFNEVDYSGV HRGTCHCLPC
QRAFAIFAPG VEMPTGPASP TYRVWKRFTE AVLDDLTSRV RDHVSARRPE APLILGDRAD
IVFHEANNAV GRTLWHHRTA EHVSAARTYR PGVPVLTNAV GFVDMPYRLA GEEPHHFAQY
LVQAFSRGAN PSTYIMGTPD DVTYECLDAA GELTRFHRDH ERFYRDLVSA ARVLLVRPDP
LKLAPARWEE AVHEFRGLYS SLLERHIPFD VLPEPRVRDV DRQGRLGDYG LVVLPDLGPL
DQETVDALGR YAEAGGGVLA TGTSGFDGDA SLIEGSPVLR RTAVRDTVES VRSLHLRRPG
RDGARRGGDL PVVGAFHVVE PVADADTDLP VLSRAPYGPP EKCHGHLLLD HPGALWRAHG
RGRVAVLPWT PGRAYHQLGL SGHRDVFVET ALRAASGPVE VDTDLPEQVE VVLGVSEAGG
VVHLVNHSGA VPQGFRTPLP VDGRRLRVPW WTGQPTRALR ADTDLTVAEK GGEGVALPRV
DLFEVLVTER PVNAR