Gene Ndas_0400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_0400 
Symbol 
ID9244238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp491027 
End bp491929 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content70% 
IMG OID 
ProductSubstrate-binding region of ABC-type glycine betaine transport system 
Protein accessionYP_003678354 
Protein GI297559380 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACAAGA GAATCGCCCT GCCCCTGGCC GCGCTGCTCC TGACCGGGTG CGGCGCCAGC 
GACCCCTACG CGGAGGAGGG CGGCGGCGGG TCCGGAGGCG GCTCCGGCGA CGCGGTCGTC
ATCGGCTCCG CCGACTTCCC CGAGTCCACC CTGCTCGCCG AGATCTACGG CCGGGCCATG
GAGGCCGAGG GCGTGGAGGT CGACTACCAG CTCGGCATCG GCAGCCGCGA GGTCTACTAC
TCGCAGATCG AGTCCGGCAA CCTGTCGGTG TTCCCCGAGT ACAACGGCGC GATCCTGGCC
TACCTCGACG AGAACGCGCC CACCGGCAGC AGCGAGGAGA CCAACCAGAG GGTCACCGAG
GCGCTGCCCG AGGGCCTGGA GATCCTGGAC TCCTCCAGCG CGGAGAACAA GGACTCGGTC
ACCGTCACCA GCGAGGTCGC CGAGGAGCAC GGTCTGGCCA GCCTGGAGGA CCTGGCCGGT
GCCGCGGGGG AGCTGACCCT GGGCGGCCCG CCGGAGTTCG AGACCCGCCA GCAGGGCGTG
GTGGGCCTGG CCGACGTCTA CGGTGTGGAG TTCGGCGAGT TCCGTTCCCT GGAGGTGGCG
CTGCTGACAC AGGCGCTCCT GGACGGTGAC ATCCAGGCGG CCAACCTGTT CACCACCGAC
CCGCAGATCA CCGCGAACGA CTTCGTGGTC CTGGAGGACC CGGAGAACCT GTTCGGCGCG
CAGAACATCA CCCCGCTGGT CAACGGCGAG CAGGTGGACG AGACCGCCCG GGGCGCGCTG
AACGCCGTCT CCGCCGCCCT GACCACCGAG GCCCTCACCC AGCTCAACGA GCGGGTGGTC
ATCGGCAACG AGAACGCCGC CGACGTCGCC CAGGAGTGGT TGGAGCAGGA GGGGCTGGCC
TGA
 
Protein sequence
MYKRIALPLA ALLLTGCGAS DPYAEEGGGG SGGGSGDAVV IGSADFPEST LLAEIYGRAM 
EAEGVEVDYQ LGIGSREVYY SQIESGNLSV FPEYNGAILA YLDENAPTGS SEETNQRVTE
ALPEGLEILD SSSAENKDSV TVTSEVAEEH GLASLEDLAG AAGELTLGGP PEFETRQQGV
VGLADVYGVE FGEFRSLEVA LLTQALLDGD IQAANLFTTD PQITANDFVV LEDPENLFGA
QNITPLVNGE QVDETARGAL NAVSAALTTE ALTQLNERVV IGNENAADVA QEWLEQEGLA