Gene Ndas_0398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_0398 
Symbol 
ID9244236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp489358 
End bp490260 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content75% 
IMG OID 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003678352 
Protein GI297559378 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGCCG AGGCCGTCGC CGGGGTCTGG GACGCCGGGT CCGCGGCCGG ATCCGGCACC 
GGGGCGCTCG CCGGGGCGTG GGACTGGGTC GTGCGCGTCG TGGACTGGGG CGTCGGGAAC
TGGAGCCACC CCGGCGACCC GGACCGGGGC GTCCTGCCCC GCCTGACCGA GCACATGCGG
CTGTCCTACC TGTCCATCCT CATCGGACTG GCGGTCGCCC TGCCCCTGGG GCTGGCGTGC
GCGCGCTGGA AGCCCCTGTA CCCGCCGGTG CTGACCGGTG TGAACGTGCT CTACGCGGTG
CCCTCCATCG CCCTGTTCTT CCTCATGCTG CCCTACACCG GGTTCAGCGA CTGGACGGCC
GTCGTGCCGC TGGCCCTGTA CACCCTGGTG ATCCTGCTGC CCAACGTGGT GGACGGGCTG
CGCCAGGTTC CCGACCACGT GCGCCAGGCG GCCGTCGCCA TGGGCTTCGG TCCGCTGCGG
CGCCTGCTGT ACGTGGAGAT GCCGGTGGCC GTGCCGGTGG TCATCGCCGG GTTGCGGGTG
GCCTCGGTGG CCACCATCAG CATGGTCAGC GTCGCCTCGC TGGTGGGCCT GGGCGGGCTC
GGCCGGCTCA TCCTCAGCGA GGGCTTCCGG CGCCAGTTCG ACGCGCCCAT CGTGGTCGGC
ATCGTGCTCA CCGTGGCCCT GGCGTTCGTC ACCGACGCGG TGCTCGTGCT CGCCCAGCGC
CTGCTCACCC CCTGGTCGCG CCGCGACGGC GCCGTACCGC GCCGCAGGCG CCGGGCGGTC
GCGGCGGAGG CGGCCGCGGC GGACCCGGCA GTGGGTTCGG CAGCGGAGCC GCAGGCCGCG
ACCGCGGCTG GGGGACGGTC GCCAGCGGAC CCGGGCACCG GTGGCACGGC GGGGGAGAGG
TAG
 
Protein sequence
MIAEAVAGVW DAGSAAGSGT GALAGAWDWV VRVVDWGVGN WSHPGDPDRG VLPRLTEHMR 
LSYLSILIGL AVALPLGLAC ARWKPLYPPV LTGVNVLYAV PSIALFFLML PYTGFSDWTA
VVPLALYTLV ILLPNVVDGL RQVPDHVRQA AVAMGFGPLR RLLYVEMPVA VPVVIAGLRV
ASVATISMVS VASLVGLGGL GRLILSEGFR RQFDAPIVVG IVLTVALAFV TDAVLVLAQR
LLTPWSRRDG AVPRRRRRAV AAEAAAADPA VGSAAEPQAA TAAGGRSPAD PGTGGTAGER