Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_0251 |
Symbol | |
ID | 9244085 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 313743 |
End bp | 314360 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | ABC-type thiamin-related transport system, permease component 1, predicted |
Protein accession | YP_003678206 |
Protein GI | 297559232 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0831069 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAGGG ACACCACCCC CCAGGGCGCC GGCTTCCGGC GCGACCTCCT CGGCCGACTG CGGAGCTGGC GCACCGTCGA CATCGTCGTG GCCTCCGTGA TCGGCGTCGC GGTCGGCGTG GTCTTCTGGC TCTGGAACAT CGTCTGGTCG GTCACGACCC CGCTGTTCGT CGGCTTCCCG CCCGCGCAGG CCGTCGTCTA CGGCATGTGG CTGATCTCCG GCGTACTGGG CGGCCTGATC ATCCGCAAGC CCGGCGCGGC CCTGCTCACC GCCATCGCCG CCGCCTCGGT CTCGGCGCTC CTGGGCACCC AGTGGGGGAT CATGGTCATC CTCGACGGCG CCCTCCAGGG CATCCTGCCC GAACTCGTCT TCCTCGCCTT CGGCTACCGC CGCTGGGGCA TGGGCGTGGC CGTCCTCGCG GCGGCGGTCG CGGGCGTCTC CCCCGCCATC CGCGACAACC TCGCCTACAA CGTGACCTGG CCGCTGTCCT ACCAGGTCAC CTACGGCGTC ATCGTGGTGG TCAGCGCCGC CCTCATCGCG GGCGTGGGCT CCCGCCTGCT CACCACCGCC CTGGCCCGCT CCGGGGCGCT GGCCCCCTTC CCGTCCGCGA GGGGCTGA
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Protein sequence | MKRDTTPQGA GFRRDLLGRL RSWRTVDIVV ASVIGVAVGV VFWLWNIVWS VTTPLFVGFP PAQAVVYGMW LISGVLGGLI IRKPGAALLT AIAAASVSAL LGTQWGIMVI LDGALQGILP ELVFLAFGYR RWGMGVAVLA AAVAGVSPAI RDNLAYNVTW PLSYQVTYGV IVVVSAALIA GVGSRLLTTA LARSGALAPF PSARG
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