Gene Ndas_0157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_0157 
Symbol 
ID9243988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp196166 
End bp197254 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content73% 
IMG OID 
ProducttRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 
Protein accessionYP_003678113 
Protein GI297559139 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTTGC GTGTACTCGC CGCCATGTCG GGCGGGGTCG ACTCCGCGGT CGCCGCGGCC 
CGTGTGGCCG AGGCGGGCCA CGACGTCACC GGTGTCCACC TGGCGCTCTC CAAGAACCCG
CAGTCCTACC GCACGGGCGC TCGCGGCTGC TGCACCGTGG AGGACTCCCA CGACGCGCGG
CGGGCCGCCG ACGTCATCGG CATCCCCTTC TACGTCTGGG ACATGTCGGA GGAGTTCGAC
CGCGAGGTCG TACAGGACTT CGTGGCCGAG TACGAGGCGG GCAACACCCC CAACCCCTGC
CTGCGCTGCA ACGAGAAGAT CAAGTTCGAG GCGGTGCTGG ACCGGGCCGT CGCCCTGGGC
TTCGACGCCG TGGCCACCGG ACACCACGTC CGCAAGGTCG ACGGGCGCCT GGTGCGCAGC
GTGGACGCGG CCAAGGACCA GTCCTACGTG CTGGGCGTGC TCAACGCCGA GCAGCTGGAG
CGCGCGGTGT TCCCGCTGGG GGACTGCACC AAGGACGAGG TGCGCGCGGA GGCCGAGCGG
CGCGGCCTGT CGGTGGCGGA CAAGCCCGAC AGCCACGACA TCTGCTTCAT CGCCGACGGT
GACACGGCGG GCTTCCTCAA CCGGCGCATC GGCGAGCGGC CGGGGCCGAT CCGGGACGAG
GACGGCACGG TGGTGGGCAC GCACAACGGC TCGCACACCT TCACCGTGGG CCAGCGCAAG
GGCCTGGGCC TGGGCGGCGC CGCCCACCCG CGGTACGTGC TCTCCATCGA GCCGGTCGAC
AACTCCGTCA CGGTGGGGCC GCGGGCGTCC CTGCGGGTGG ACGCCATCAC CGGCGTGCGC
CCGGTGTGGA GCGGCAGCGA GCCCCTGACC GAGCCGACCG ACTGCCACGT GCAGCTGCGC
GCCCACGGCG AGGTCTACCC GGCGAGCGTG TGGCAGCGCG AGGCCGACGG CGGTCCCGAG
CTGGTCGTCC GGCTGGCCGA ACCCGCGACC GGCGTGGCCA CCGGGCAGGC CGTGGTGGTC
TACCAGGGCG ACACGGTGCT GGGATCGGCC ACGATCTCCG CCACCTCCAG AACCGGCGCC
GCGGTCTGA
 
Protein sequence
MTLRVLAAMS GGVDSAVAAA RVAEAGHDVT GVHLALSKNP QSYRTGARGC CTVEDSHDAR 
RAADVIGIPF YVWDMSEEFD REVVQDFVAE YEAGNTPNPC LRCNEKIKFE AVLDRAVALG
FDAVATGHHV RKVDGRLVRS VDAAKDQSYV LGVLNAEQLE RAVFPLGDCT KDEVRAEAER
RGLSVADKPD SHDICFIADG DTAGFLNRRI GERPGPIRDE DGTVVGTHNG SHTFTVGQRK
GLGLGGAAHP RYVLSIEPVD NSVTVGPRAS LRVDAITGVR PVWSGSEPLT EPTDCHVQLR
AHGEVYPASV WQREADGGPE LVVRLAEPAT GVATGQAVVV YQGDTVLGSA TISATSRTGA
AV